Phage RBP Database

Genbank accession

AXC40569.1 [GenBank]

Protein name

tail length tape-measure protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,77

Protein sequence

MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMMGITKSMDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRALGNTARGFNDTTTAAGRASRAIGNTSGSARGATRDFAAMAKVGGGLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPTNVGAVALSLSASEEGYNKALDMYKESLEKRNKLKADLDKRMQQADASTAGAIRLVAQGAPVGLAAGGFEVGGVRIGSSEENQKFIADTAALALQVERLDKEVEDSTGNLNAWKSAYQAAGAAAAKANPEFQKQINLQKDANDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTGNETKNQLEVQQKIAEVYSQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIEGEIAKIQLERIKITNQGMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTIEKEKYEWYSKQVDKHKEAEQSRRAQAQIEREIWKFRQDQQREMAAGREEEQQRKFTANPLMGAAERIKEQIQLFEDLKQKTLGNAAAQLEYNKKLAETRAQLAALRVQRDAEMQSSVGAAVGATYTPTTGLTGEDKNFADMQNRMASYDQAISKLSELNSEATAVAQSMGNLTNAMIQFSQGSLDTTSLVAAGMQTVSSMIQYSVGQQVSAIDAAIAAEQKRDGKSEQSKAKIKKLEAEKLKIQQDAAKKQIIIQTAVAVMQAATAVPYPFSIPLMVAAGLAGAMALAQASSASGMSSIGDSGAETAGYLTLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKGTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS

Physico‐chemical properties

protein length:	1235 AA
molecular weight:	132813,73520 Da
isoelectric point:	5,93919
aromaticity:	0,05263
hydropathy:	-0,42267

Domain architecture

AXC40569.1

1 1235 aa

TAS 1–81 · TAS 1198–1233 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR056207
TAS

IPR056207 Coil Coil Coil IPR056208

AXC40569.1

11235 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0073
STR

DC_0073

AXC40569.1

11235 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR056207	TAS	DC_0547	1	81	InterPro cluster	Tape measure protein PB2, N-terminal	N-terminal	High	Text match	97 proteins / 97 hits
Coil	Unmapped	-	586	613	Coils	Coil	-	-	-	-
Coil	Unmapped	-	709	729	Coils	Coil	-	-	-	-
Coil	Unmapped	-	1021	1041	Coils	Coil	-	-	-	-
IPR056208	TAS	DC_0881	1198	1233	InterPro cluster	Tape measure protein PB2, C-terminal	C-terminal	High	Text match	95 proteins / 95 hits

Proteins with similar domain architecture

Phage

Salmonella phage S116 [NCBI] · taxon 2231345

Uroviricota Caudoviricetes Demerecviridae Epseptimavirus Epseptimavirus S116

Host

Salmonella typhimurium [NCBI] · taxon 90371

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

AXC40569.1 [NCBI]

Genbank nucleotide accession

MH370369 [NCBI]

CDS location

range 11158 -> 14865
strand +

CDS

ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAATCTATTGAGAACGTTTCCGATGCGTTAGAAAATGCTGCTGCCGCTTCCGAACTGACTAATGAACAGTTAGGAAAAATGCCCAAAACTCTTTACTCCATTGAGAGGGCGGCGGATAGAGCAGCTAAAAGTCTAACTAAAATGCAGGCTAGCAGAGGTATGATGGGCATCACCAAATCTATGGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATCGAGGTATCTGATAAGCTAGAGTCTGGATTTACACATGTTGGTAAATCTGTTAAGGCTATGGGTAACGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATATGATACTAACCGAGCACTAGGTAATACTGCTAGAGGCTTTAATGATACAACTACCGCTGCAGGACGTGCTAGTCGTGCAATTGGTAATACTTCTGGTTCAGCACGTGGTGCAACTCGTGACTTCGCAGCTATGGCTAAAGTGGGTGGTGGTTTACCTCTTATGTACGCTGCTATCGCATCTAACGTGTTCGTTCTACAATCTGCATTCGAACAGCTTAAGATGGGTGACCAGTTAAACCGTCTTGAGAAGTTTGGTACTATTGTTGGTACTCAAACAGGTACTCCGGTACAAACGCTAGCTAGATCTCTGCAAGAGGCTGCTGGTTATGCAATCTCCTTCGAAGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAGGGTGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAATGATGCTTACGCTGACTACGTTAAACAGTTAAATGCTGCTAACACAGGTATTACGTATAACGTCAATAGTCTTTCCACTTTCCAAAAGCAACAAGCATATGCTAACGCAGTAATCGCTGAATCTACTAAACGTTTCGGCTACTTGGATGACGTACTTCGTGCAACTCCATGGGAACAGTTTGCTGCTAATGCTGATGCTGCACTGAGAAAGGTTCAACAGGCTGCTGCTAAGTATTTAGGGCCAGTAATTGATTCTATCAACGCAGTGTTCTATACTTCTCAAGCATCTATCTCGGCCTCTGCTGCTAGAGCACAGGAAGAAACTAACCGTCAGATTGACCCAACTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCTGAGGAAGGATATAATAAAGCTCTTGATATGTACAAAGAATCTCTAGAAAAGCGTAATAAGTTAAAAGCTGATCTAGATAAGCGTATGCAGCAAGCAGATGCATCTACAGCAGGGGCTATTCGTTTAGTTGCTCAAGGTGCACCGGTAGGGTTAGCTGCAGGAGGTTTTGAAGTAGGAGGAGTTCGCATAGGATCTTCTGAAGAAAACCAGAAATTTATTGCAGATACTGCTGCATTAGCTCTCCAGGTAGAGCGTCTTGATAAGGAAGTAGAGGATTCAACTGGCAATCTTAATGCATGGAAATCGGCATACCAAGCTGCTGGTGCTGCAGCTGCTAAGGCTAATCCAGAATTCCAGAAGCAAATTAACCTACAGAAAGATGCAAATGACCCTGATGCGGTTTATGACTTCAACTCTGCAACTCTGAAAGGACTGACAGAACAGCAGAAAGCATATGATCAGGCTAAGAAAACTGCTAGTGATTTAGCTAACGATATCCAGAACATCGCTCAGAATACTAATACTGCGGCTAAAACTAGTGCATCCTTATCAGATACGATTAAGACTATTGAGTCTCTATCCGCGGGTACTGGTAAAAATGCTGATGAGTATGTTAAGAGCCTGAACTTAGGGTATAATACTCTTAGTGAGATGAAGACTGCTTCACAAGCTCTTGCTGGTTATGTAAAATTAACTGGTAATGAGACTAAGAATCAGCTAGAAGTTCAGCAGAAGATTGCCGAAGTGTATAGCCAGACTAAGGACAAAGAGAAAGCACAGGAAGCTGGTAGACGTCTGGAAATCCAACAGTTAGAAGAACAGGAAGCAGCTCTTAAGCGTGTCCTAGAAACTAACAAGGGTAACAAAGCAATCGAAGGTGAGATAGCTAAGATTCAGCTAGAACGTATCAAGATCACTAACCAAGGTATGGAAGCTCAGAAGAAGGTTAAGGACTATACCGATAAGATTCTTGGTGTTGATCGTGAAATTGCTCTCCTGAATAACCGTACTATGACAGATACTCAATATCGTTTAGCTCAGTTGAACCTTGAACTGACTATCGAGAAAGAAAAGTATGAATGGTACTCCAAACAGGTTGATAAGCATAAGGAAGCTGAACAATCAAGACGTGCTCAGGCACAAATTGAACGTGAAATCTGGAAATTCCGTCAGGATCAGCAAAGGGAAATGGCTGCTGGCAGGGAAGAGGAGCAACAAAGGAAATTTACCGCAAATCCTTTAATGGGAGCTGCGGAACGTATCAAGGAGCAAATCCAGCTATTCGAAGACCTTAAGCAAAAAACTTTAGGGAATGCTGCTGCTCAGTTAGAGTATAATAAAAAGCTAGCAGAAACTAGAGCCCAGCTCGCAGCTTTAAGAGTACAGCGCGATGCAGAAATGCAGTCTTCTGTAGGTGCGGCTGTAGGGGCTACGTATACTCCTACTACTGGATTAACTGGAGAAGATAAAAACTTCGCAGATATGCAGAATAGAATGGCGTCCTATGACCAGGCTATTTCTAAGCTGTCTGAACTGAACTCCGAAGCAACCGCTGTAGCACAAAGCATGGGTAACCTAACTAACGCTATGATCCAGTTCTCACAAGGATCTCTGGATACCACTTCTCTAGTAGCGGCTGGTATGCAAACTGTGTCTTCAATGATTCAGTATAGTGTTGGTCAACAGGTAAGTGCTATTGATGCAGCTATTGCAGCAGAACAGAAACGTGATGGTAAATCTGAGCAATCCAAAGCTAAGATCAAGAAGTTAGAGGCTGAAAAGCTCAAGATCCAGCAAGATGCAGCTAAGAAGCAAATCATTATCCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCGTATCCATTCTCTATTCCTCTGATGGTTGCGGCTGGTTTAGCAGGTGCTATGGCTCTTGCTCAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGAGACTCTGGTGCTGAGACAGCGGGTTACTTAACTCTTGGAGAGCGCCAGAAGAATGTAGACGTTTCTATGTCGGCTAACGCAGGTGAACTTTCTTATATTCGAGGAGATCAAGGGATTGGTAATGCTAACTCTTTCGTACCTCGTGCAGAAGGTGGTAATATGTATCCTGGAGTTAGTTACCAGATGGGTGAGCATGGTACCGAAGTAATTACTCCTATGGTTCCGATGAAGGCTACCCCTACTGATGAACTCAAAGGATCTTCAAAAGGCACATCGGGTAGACCTATTGTGCTGAACATCAGTACGATGGATGCGGCTAGCTTCCGAGATTTTGCTTCGAGCAATAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)