Protein

View in Explore
Genbank accession
UYE97341.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,65
Protein sequence
MTVHFNSATGKLMFPWEFIGVSGKNYITNRGKVVPRVSLTPRLVKGADPFHRKAGETPALDLDFASNKSFTDTISGKNLVTFTRASSGTFVGADGLIKTTPVNLIIYSEQFDNSAWTKANGSTVNLNAVAAPDGTNTGSIVNFSALNSRFFQTKTLTAGTYTLSVFLRVSSGSKALTMQVFNSTDGSQNKNITVTDSWQRFTHTVTVSGGASQLHPVRPDDLGDVYVWGAQLEEGSTATDYIPTTSTISGAPRFEHEASTGESLGLLIEEARTNEISNDITLTSPTTGVTLSEDTAVTNPDGTTGAIKITADAGNSVHTTQRNSNVTTTNHTFSIFVKKGNHRYIGLSQGGTSNNIHVVFDTDTKTITDDGSKNNGTFVSSGFEEYANGWFRIHVVGFTQGTVLRVFLAQNAEQNGLKSWTATGNEFAYVWGLQREDGTFPTSYIPTSGSAVTRAADVAEITGADFAKTNLAEHSQRLEQTRGMFNTTGLNGGSSIYPNNISAPNGSTTADKFTRGGTGTGNYQNVLVTTKAASSLTYTYSLHFKKEDARYVSMRMQGVYPARADVVFDLDTGTIAVPASVTGGYVTASSTITNVNGGWYRCTLTATTNSDTRLQINYSCSAETSQIDGPSSVINSVYVWGVQLEEGDVPTEYTPSVESLVSRASSATYVDDTTGLITTAAVNEARYENGELILEEARTNVIDRNTSNFNSIWSNTTPGGAYNNAGIAPDGTNTAFATTSYGGVIRGQKNYTTNADTNDYTFSIFIKSTSGQGRYTTYKTGFHNGDQDTLNQVAYDFATDTVGHGYSRKLYANGWVRIWKTYKNSNKLTFLTTNYNTTSLDMLFWGAQLEQGSYPSSLIITPDGANVTRAADVSTSALGVDSFYTQTEGTVFVEASNYPHPITGKALVPFAYSDNSFNNRVNLASSTGNDQFNFDVTGGGSQQRAILGNFVSTGLKASGGYKVTGSAGSLDGATAVTSSTPNIPSSIDRLDIGNAHNGQEPLNGHIKRITYIPTRLPDATLQSITS
Physico‐chemical
properties
protein length:1026 AA
molecular weight: 109811,18000 Da
isoelectric point:5,64499
aromaticity:0,09552
hydropathy:-0,34639

Domains

Domains [InterPro]
G3DSA:2.60.120.260
108–216
G3DSA:2.60.120.260
UYE97341.1
1 1026
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM54
[NCBI] 		1137744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97341.1 [NCBI]
Genbank nucleotide accession
OP053362 [NCBI]
CDS location
range 163558 -> 166638
strand +
CDS
ATGACCGTTCATTTTAATTCCGCTACGGGAAAACTAATGTTTCCTTGGGAATTTATTGGAGTTAGCGGTAAAAATTACATAACTAACCGGGGTAAAGTTGTACCTAGGGTTAGTCTTACGCCCCGACTTGTAAAGGGTGCAGATCCTTTTCATAGAAAAGCCGGTGAGACTCCTGCGTTAGATTTAGATTTTGCCTCTAATAAATCTTTTACTGATACTATTTCAGGAAAGAACTTGGTTACGTTTACCCGTGCCAGCAGTGGAACTTTTGTTGGTGCAGATGGGTTGATTAAGACCACGCCTGTCAATTTAATTATTTACAGTGAGCAGTTTGACAATTCTGCTTGGACAAAAGCCAACGGATCTACAGTAAATCTTAATGCAGTAGCTGCTCCAGATGGTACTAATACTGGAAGTATTGTAAATTTTTCTGCTTTAAACTCTAGATTTTTTCAAACTAAAACTTTAACGGCTGGCACTTATACGCTGAGCGTATTTCTGCGTGTTTCATCAGGATCTAAGGCACTTACGATGCAGGTGTTTAATTCCACAGATGGATCACAAAATAAAAACATTACAGTTACTGATTCGTGGCAAAGATTTACTCATACAGTAACGGTGTCAGGTGGTGCTTCTCAATTACACCCAGTCAGGCCAGATGACTTAGGTGATGTTTACGTTTGGGGTGCTCAACTGGAAGAAGGCTCCACTGCCACTGACTACATCCCCACCACCAGCACAATCTCCGGTGCTCCTCGCTTCGAACACGAGGCCTCAACAGGGGAAAGCCTTGGGTTGCTGATTGAAGAAGCTAGAACTAACGAAATTAGTAACGACATTACTTTAACTAGTCCTACTACGGGAGTAACTTTATCTGAAGATACTGCGGTTACGAACCCTGATGGTACAACAGGTGCGATCAAGATTACGGCGGATGCAGGAAATTCAGTTCATACTACTCAAAGAAACTCAAATGTTACAACCACTAATCATACATTCAGTATTTTTGTAAAGAAAGGCAATCATCGTTACATTGGATTAAGTCAAGGTGGAACGTCAAACAATATTCACGTTGTTTTTGATACTGATACAAAGACTATTACTGATGATGGATCCAAGAATAACGGTACTTTTGTGTCTTCTGGGTTTGAAGAATATGCTAATGGTTGGTTTCGGATACATGTGGTTGGTTTCACACAGGGAACTGTGTTGCGTGTTTTTCTAGCTCAAAATGCCGAGCAAAATGGTTTGAAAAGTTGGACTGCCACGGGTAATGAATTTGCCTACGTCTGGGGTCTACAAAGAGAGGACGGTACTTTCCCGACTTCCTACATTCCCACCTCCGGCTCTGCCGTCACTCGTGCAGCAGACGTTGCTGAGATCACTGGTGCGGACTTTGCGAAGACGAACCTGGCTGAACACAGCCAGAGGCTTGAGCAGACTAGGGGAATGTTTAACACTACTGGGCTAAATGGCGGTAGTTCTATTTACCCTAATAATATATCTGCACCTAATGGATCAACCACAGCCGACAAGTTTACTAGAGGCGGTACCGGTACTGGCAACTATCAGAATGTGTTGGTCACTACTAAAGCCGCTTCATCACTTACCTACACCTATAGTCTTCACTTTAAGAAGGAAGACGCACGTTATGTCAGTATGCGGATGCAAGGCGTCTACCCAGCTAGGGCTGATGTTGTTTTCGATTTAGACACAGGTACGATTGCAGTCCCAGCATCTGTAACAGGTGGCTATGTCACAGCAAGTTCGACCATTACTAATGTTAATGGAGGTTGGTATCGATGTACTTTGACTGCAACCACAAACTCTGATACAAGGTTGCAGATTAACTATTCATGCTCCGCTGAAACTTCTCAGATTGACGGACCATCTTCAGTTATCAATAGCGTTTATGTGTGGGGCGTCCAACTAGAAGAAGGCGATGTTCCGACCGAATACACCCCATCCGTTGAATCCTTAGTCTCCCGTGCATCCTCTGCAACTTATGTGGATGATACGACTGGGTTGATTACTACTGCCGCTGTTAATGAAGCACGCTACGAGAATGGCGAGCTGATTCTGGAAGAGGCTAGGACGAACGTCATTGATAGAAACACAAGTAACTTCAATTCAATTTGGAGTAACACGACTCCTGGTGGTGCCTACAACAACGCAGGGATTGCGCCAGATGGCACTAATACTGCTTTTGCTACTACATCTTACGGCGGAGTTATCAGGGGTCAAAAAAACTATACAACAAATGCTGACACCAACGATTACACGTTCTCTATCTTTATTAAATCTACTAGTGGCCAAGGCAGATATACAACATACAAAACTGGATTTCATAATGGAGACCAGGATACACTAAATCAGGTTGCTTATGACTTTGCTACTGACACAGTAGGACATGGTTATTCCCGTAAATTGTATGCCAACGGTTGGGTTCGTATTTGGAAAACTTATAAGAACAGCAATAAACTTACTTTCCTGACTACAAACTATAACACCACCTCTCTTGATATGTTATTTTGGGGTGCTCAACTTGAGCAAGGTTCTTACCCAAGTTCACTGATCATTACTCCTGATGGCGCTAACGTCACCCGTGCTGCTGATGTATCGACCAGTGCTCTGGGTGTTGATAGTTTCTACACCCAGACTGAAGGTACGGTGTTTGTTGAGGCATCAAACTATCCCCACCCAATTACCGGTAAGGCGCTTGTACCGTTCGCTTACAGTGACAATAGTTTTAACAATAGAGTTAATTTGGCTAGCTCAACTGGAAATGATCAATTTAACTTTGATGTGACAGGTGGTGGTTCGCAACAGCGCGCAATTCTTGGCAATTTTGTCAGCACCGGATTAAAAGCTTCTGGTGGATACAAGGTCACTGGATCTGCTGGTTCTCTTGATGGCGCAACTGCTGTTACTTCAAGCACTCCTAACATCCCATCCTCTATTGACCGTTTGGATATTGGTAATGCTCATAATGGACAAGAACCGTTGAATGGTCACATCAAGCGAATCACGTACATCCCAACGCGTTTACCTGACGCAACACTACAATCAATCACTTCCTAA

Tertiary structure

PDB ID
557146fffad52ed5e6ca03fc764776a1890e61a8ea37aefa626cc82c6a68bbf9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2494
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank