Phage RBP Database

UniProt accession

A0A4D6DX53 [UniProt]

Protein name

Short tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,97

Protein sequence

MSNNNTYQHVSNESIYVEFDPTGSNFPDTVTNVQAALAAISPSGVNGVPEATTTTPGIIQIATPQEVIDGLDNNKAVTPASLNARLQYPNATETQYGLTRYATEDEAVAGAIDDASITPLKLNQKIDNVFQTKVSTEATNGVIKISTSAAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNSDATESITGVVRLATVAQAQQGTLREGYAISPYTFMNSVASETNKGVVKLGTQTEVNSNNSSVVVTGATLNGRGATTSLRGVVRLTTQAGSQSGGDGSSALAWNADVIHQRGGQTINGTLRINNTLTVGSGGANITGNVNMTGGYIQGNRIVTQNELDRILPVGAITMWAADSLPSSDWRFCHGGTVSASECPVYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGNHLTNPNVNGNDQFGKPRLAVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDAGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPASQRNSKYTLNRPELIGNETRPWNISLNYIIKVK

Physico‐chemical properties

protein length:	527 AA
molecular weight:	55705,88460 Da
isoelectric point:	6,40708
aromaticity:	0,06072
hydropathy:	-0,39639

Domain architecture

A0A4D6DX53

1 527 aa

STR 247–330 · ATT 331–401 · STR 402–526 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF69349
STR

SSF69349 IPR037053 IPR044916

IPR015173
STR

IPR015173 SSF88874

G3DSA:2.10.280.10
Unmapped

G3DSA:2.10.280.10 G3DSA:2.160.30.10 IPR011083 IPR027448

A0A4D6DX53

1527 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0176
STR

DC_0176

A0A4D6DX53

1527 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF69349	STR	SSF69349	247	327	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
IPR015173	STR	DC_0719	247	327	InterPro cluster	Bacteriophage T4, Gp12	Central	Low	Positional only	349 proteins / 349 hits
G3DSA:2.10.280.10	Unmapped	-	247	287	Gene3D	None	-	-	-	-
G3DSA:2.160.30.10	RBD	G3DSA:2.160.30.10	288	330	Merged direct domain	G3DSA:2.160.30.10	C-terminal	Low	Positional only	1 proteins / 1 hits
IPR037053	ATT	IPR037053	331	397	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	335	526	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	345	401	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR044916	STR	IPR044916	398	519	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits
IPR027448	RBD	DC_0877	434	526	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits

Proteins with similar domain architecture

Phage

Shigella phage SSE1 [NCBI] · taxon 2562131

Uroviricota Caudoviricetes Pantevenvirales Tevenvirinae Mosigvirus

Host No host information

Genbank protein accession

QBZ70885.1 [NCBI]

Genbank nucleotide accession

MK639187 [NCBI]

CDS location

range 18596 -> 20179
strand -

CDS

ATGAGTAATAACAATACATACCAACACGTTTCAAATGAATCTATTTACGTTGAATTCGACCCTACTGGGTCGAATTTTCCAGATACAGTCACTAATGTCCAAGCCGCATTAGCTGCTATTTCTCCTTCAGGTGTTAATGGTGTACCGGAAGCAACAACTACTACACCAGGAATTATTCAAATAGCTACTCCACAAGAAGTTATTGATGGATTAGATAATAATAAAGCTGTTACTCCGGCATCACTGAATGCTCGTCTACAATATCCTAATGCAACCGAAACTCAATATGGTTTAACTCGTTATGCTACTGAAGATGAAGCAGTAGCCGGAGCTATTGACGATGCATCAATTACTCCGCTTAAATTGAATCAAAAAATAGACAATGTATTCCAGACAAAAGTATCAACAGAAGCAACAAATGGTGTAATTAAAATTTCAACTTCTGCTGCGGCATTAGCTGGTTCTGACGATACAACGGCAATGACTCCGTTAAAAACGCAACAATTAGCAATTAAACTTATTTCGCAAATTGCTCCAAATAATAGTGACGCCACCGAATCTATTACAGGTGTTGTTCGTTTAGCTACAGTTGCACAAGCACAACAAGGCACCCTGCGTGAAGGCTATGCAATTTCACCTTATACCTTTATGAATTCAGTAGCATCAGAAACTAATAAAGGTGTCGTTAAACTAGGGACACAGACTGAAGTAAATAGTAACAACTCTTCAGTTGTAGTGACCGGCGCAACATTAAACGGGCGTGGGGCTACAACTTCTTTACGTGGAGTTGTTCGTTTAACTACACAAGCGGGTAGCCAATCAGGTGGTGATGGTTCTTCTGCCCTTGCTTGGAATGCTGATGTTATCCACCAACGAGGCGGTCAAACTATTAATGGCACGCTTCGCATTAATAATACGTTGACTGTTGGTTCTGGTGGTGCTAATATAACGGGTAATGTCAATATGACCGGTGGTTATATTCAAGGCAATCGTATTGTGACTCAAAATGAATTAGACCGAATTCTTCCAGTTGGCGCTATTACAATGTGGGCTGCAGATAGTTTGCCGAGTTCGGACTGGCGTTTCTGTCACGGTGGGACCGTTTCTGCTTCAGAATGTCCGGTATATGCTTCCAGAATTGGGACACGATATGGTGGTAGTTCTTCTAACCCAGGCTTGCCCGATATGCGTGGATTATTTGTTCGCGGCTCAGGTCGTGGTAACCATTTAACTAACCCTAATGTTAATGGTAATGACCAATTCGGTAAGCCTCGTCTGGCGGTAGGTTGTACCGGTGGATATGTTGGTGAGGTGCAAAAACAACAGATGTCATATCATAAGCATGCTGGCGGTTTTGGTGAACATGACGATGCAGGAGCATTCGGTAATACTCGTCGTTCAAACTTTGTTGGTACTCGTAAAGGACTTGACTGGGATAACCGTTCGTATTTTACTAACGATGGATATGAAATTGATCCAGCGTCTCAGCGTAACTCTAAATATACCCTGAATCGTCCAGAATTAATTGGAAATGAAACTCGCCCATGGAATATTTCTTTAAACTATATCATTAAGGTAAAATAA

	Description	Category	Evidence (source)
GO:0098024	virus tail, fiber	Cellular Component	IEA:InterPro (UniProt)
GO:0046872	metal ion binding	Molecular Function	IEA:InterPro (UniProt)

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)