Protein

View in Explore
Genbank accession
AYD80209.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVIKTVLTYPLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINTDYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVARLQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPLGQLKTMNQNSWQARNEALQFRNEAETFRNQAEGFKNESGTNAANTKQWRDETNGFRNEAEQFKNTAGQYATSAGNSATAAHQSEVNAGNSATASADSAASSKQQADRAKQEADKLGNWNALAGTVDSVQGDSVFWKGGGYWVGGPIYQLQTNHAFRFRMGLWEEGDFLKSDFAMDRPDGIGFIEYAADKTGQHRHQIRLNQLTIAGGVLESDADDLIAHAFADQYNTKAPFFQQIHVQSTSSYHPIIKQRTHQSGRWAGCWSIGTLLTGTSPSFHVHMKDEWAGDKLWTFNTNGDFRVPGEIWADGGRVVVRNGSFDPEGRIWGTAYNTGYLDDWIRANWPGDVYWGPQRWVQKWGGYADIVAGAGEACSGVTADGSGNVAGAFFRALWLGYHNGNKRLVASQ
Physico‐chemical
properties
protein length:554 AA
molecular weight: 61249,82910 Da
isoelectric point:6,03155
aromaticity:0,10830
hydropathy:-0,53051

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil
AYD80209.1
1 554
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage C5
[NCBI] 		2340717 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYD80209.1 [NCBI]
Genbank nucleotide accession
MH717099.1 [NCBI]
CDS location
range 33913 -> 35577
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCCGTTAGATGGCTCCAATCGTGATTTTAATATCCCGTTTGAGTATCTAGCCCGTAAGTTCGTAGTGGTAACTCTTATTGGTGTAGACCGTAAGGTCCTCACGATTAATACAGACTATCGCTTTGCTACACGTACTACCATCTCTCTGACCAAGGCTTGGGGTCCAGCCGATGGCTACACGACCATCGAGTTGCGTCGAGTAACCTCCACGACCGACCGATTGGTTGACTTTACGGACGGCTCAATCCTCCGTGCGTATGACCTTAACGTCGCTCGGCTTCAAACGATGCACGTAGCGGAAGAGGCTCGTGACCTAACTGCGGATACTATTGGTGTCAACAACGATGGTCACTTGGATGCCCGTGGTCGTCGAATCGTTAACCTAGCAAACGCTGTGGATGACCGTGATGCTGTTCCACTTGGTCAACTTAAGACCATGAACCAGAACTCATGGCAAGCACGTAATGAAGCCTTACAGTTCCGTAATGAGGCTGAGACTTTCAGAAACCAAGCGGAAGGCTTTAAGAACGAGTCTGGTACCAACGCTGCTAATACGAAGCAGTGGCGCGATGAGACTAATGGGTTCCGTAATGAGGCTGAACAGTTCAAGAATACTGCTGGTCAATATGCGACATCTGCTGGGAACTCTGCTACTGCTGCACACCAATCTGAGGTAAACGCTGGAAACTCAGCTACGGCCTCAGCGGATTCTGCGGCTTCTTCAAAACAGCAAGCAGACCGAGCGAAGCAGGAAGCAGACAAGCTGGGAAACTGGAACGCCCTTGCTGGTACTGTAGATAGCGTTCAGGGTGATAGTGTATTCTGGAAAGGAGGAGGCTATTGGGTTGGAGGTCCCATATACCAACTACAAACGAACCACGCGTTTAGGTTCCGTATGGGTCTTTGGGAAGAAGGCGACTTCCTTAAGTCTGACTTCGCTATGGACCGACCGGACGGTATAGGGTTCATAGAGTATGCAGCGGACAAGACTGGGCAACATCGTCACCAGATTCGACTTAATCAGTTAACAATAGCTGGCGGTGTGTTAGAGTCAGATGCTGATGATCTCATAGCTCACGCTTTCGCTGACCAGTATAACACTAAAGCTCCTTTCTTCCAACAGATTCATGTACAGTCTACAAGCTCATATCACCCAATAATAAAGCAACGAACTCACCAATCTGGACGGTGGGCAGGATGCTGGTCTATCGGTACATTACTGACTGGTACGTCTCCGTCATTCCACGTACATATGAAAGACGAATGGGCAGGTGATAAACTTTGGACGTTCAATACCAATGGAGACTTCCGCGTCCCTGGGGAGATTTGGGCCGATGGTGGACGTGTGGTTGTACGGAATGGCTCTTTTGACCCTGAGGGTAGAATTTGGGGTACTGCGTATAATACCGGATACCTTGATGATTGGATTAGGGCTAACTGGCCCGGCGATGTTTATTGGGGGCCTCAACGCTGGGTACAAAAGTGGGGAGGTTATGCAGACATAGTTGCTGGTGCTGGGGAAGCCTGCTCTGGTGTAACCGCTGATGGTAGCGGTAACGTTGCGGGTGCATTCTTCCGAGCGCTTTGGCTTGGATATCACAACGGTAATAAACGATTGGTTGCTTCCCAATAA

Tertiary structure

PDB ID
890f86f34015ba93e1751c69c78a72811c62bcb9b224bb4813cc59d1a486b77d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Distribution characteristics of Escherichia coli phages in piglets intestinal isolated from Jiangsu and Anhui province Lin,Y., Zhou,B., Luo,J., Hua,J. and Zhang,M. 2014-08-20 — GenBank