Protein

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Genbank accession
APU03132.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVETETYPVGALVKVNADNMLYRCLAQNINMPPSANPTQWRPVLDLTAATAAARQVGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVETEILHINWDAKNASQWGRTKGKRVIAMREKVNNTWGGWSYSYGPDNKPTASELGINQDFIPMDGSDSIRGNLGTVGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVVTAARWGSVPMSHIQHILVAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGNKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47240,40160 Da
isoelectric point:7,01708
aromaticity:0,07883
hydropathy:-0,17838

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage UPF_BP2
[NCBI] 		1913047 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APU03132.1 [NCBI]
Genbank nucleotide accession
KX826077 [NCBI]
CDS location
range 24317 -> 25651
strand -
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCCGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGTGGCTGGGGTGCAACCCTTGGCTACTCGGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATTGGTAACCGTACTGACAAAGGTATCCACTACATCCTTCAGCAGGGTGTTGATGTATGGGTAGAAACTGAGACCTACCCGGTTGGTGCACTGGTTAAAGTTAACGCCGACAATATGCTATACCGTTGTCTGGCGCAGAACATTAATATGCCACCGTCTGCTAACCCTACGCAGTGGCGCCCTGTACTCGACCTGACTGCAGCAACTGCTGCAGCACGACAGGTTGGTAAGGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGTTTAGGTGGCAACGCTGAGGTAGTTACTAATGCTAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCATCAGGTACTGGCGGACCTACTAACGGCGTTGAGACTGAGATTCTGCATATCAACTGGGATGCGAAAAACGCTTCACAGTGGGGACGCACCAAAGGTAAGCGCGTAATAGCCATGCGCGAGAAGGTTAATAATACATGGGGCGGATGGTCATACTCTTACGGGCCAGATAATAAACCTACGGCATCTGAACTGGGTATTAACCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGTGGTAACTTAGGTACTGTCGGCTGGCTGCATATTGCGCGTACTACTTCCGACTTGCTACGTGCTGCTAACTCCGCCGGTGTAGGTACTGTTGAGTATTCTGGTAACATCGCAGGTGGTACTGCTGTTCAGGAGTTGCTGACTTCAGTTTCTGTCGCGGCTAACAGTAATGTTGTCACTGCGGCTCGCTGGGGGTCTGTGCCTATGTCTCACATCCAGCACATCCTTGTTGCTGGTGGCGCTACCCAGATTAACATGGCGGTATGTCGCCCTGGCGGTATTGCCGACCGCCGTACAGTAGCTTTGCAGGTGGATGGTCTTAATAGCCGAGTAACTACCACAAATAGCTTTATTTTATGCGAGAATGGTGTTAGAGTATATTCACCTAACAACCCTCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTTGGTGCTCGTATTGCTGCTGGTGTATCCGAGTCAACGTTCTACCCTGGGCACGTAATGACTGGCTGGCGCTTCGGTAACAAGAAAGAGTTGCGTGGTGGCACATACTGGTCAGCGCCGTTACAGTATTACATTAACGGCACTTGGATTAACGTAAGCAACGTATCATAA

Tertiary structure

PDB ID
b5c6bcc94f5707044af92c41dbb83fbcdf333b8099a4aae718fcca8f6f41f2f1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6668
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and phenotypic characterization of lytic bacteriophages to Salmonella enterica biocontrol Cibulski,S.P., Siqueira,F.M., Pottker,E.S., Webber,B., Mayer,F.Q. and Rodrigues,L.B. 2020-12-31 — GenBank