Protein

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Genbank accession
XWX32422.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDKPDMESIDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKTLYRFVSGSSSSEWQFIQGLPSNKNAVISGTNILDISSPGVYFVMGMAGGMPSGVDSGFLDLSVDSNDNRLARLTDAETGKEYTSIKKPTGVYTDWKKEFEPIDMQKYILNDISDGSTKFNLLVYKSEGISFEEAVRNHIQKTGQTTFSFYSQNGVPGSPLPNSCRGLYLSDVTDVSNLHGIYYAIGTDGRFATGAVSSGSWSTPKTTPSYKELWTGAQSFLSTGATKNLSDDISNYSYVEVYTKHKTAEKTKGNDDSGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPVTEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:457 AA
molecular weight: 50402,68530 Da
isoelectric point:5,63640
aromaticity:0,10284
hydropathy:-0,39344

Domains

Domains [InterPro]
IPR057110
336–457
IPR057110
XWX32422.1
1 457
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_2
[NCBI] 		2815606 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX32422.1 [NCBI]
Genbank nucleotide accession
MZ417328.1 [NCBI]
CDS location
range 112548 -> 113921
strand +
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACAGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCTTATGGAAACATAACAGCTCTTAGAGATATAAAAGAACCCGGTTACTATTATATTGGAGCTAGAACATTAGCAACGTTATTAGATAAGCCTGACATGGAGTCTATTGATGTTGTATTACATGTAGTACCACTTGATACTTCTAGTAAAGTAGTTCAACATTTATACACATTATCTACTAACAATAATCAAATTAAAACGTTATATAGATTTGTCTCAGGAAGCTCTAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATATCAGGTACTAATATTTTAGATATATCTTCACCGGGTGTTTATTTTGTTATGGGAATGGCAGGAGGTATGCCTAGTGGTGTAGATTCAGGTTTTTTAGATTTAAGTGTAGATTCTAATGACAATAGACTAGCTAGGTTAACTGACGCTGAAACTGGTAAAGAGTACACTAGTATTAAGAAACCTACAGGAGTATACACAGACTGGAAAAAAGAATTTGAACCTATTGATATGCAGAAATATATACTAAATGATATTTCTGATGGAAGTACGAAATTTAATCTACTCGTTTATAAGTCTGAAGGAATATCATTTGAAGAGGCTGTAAGGAATCATATACAGAAAACAGGGCAAACAACCTTTAGTTTTTATTCTCAGAATGGGGTACCTGGTTCCCCATTACCAAATAGTTGTAGAGGTCTATACTTATCTGATGTTACAGATGTAAGTAACCTTCATGGTATATATTATGCTATAGGTACAGATGGTAGGTTTGCTACTGGAGCTGTTAGTAGTGGTTCTTGGTCTACACCAAAAACTACACCATCTTACAAAGAATTATGGACTGGAGCACAATCATTCTTATCTACAGGAGCCACTAAGAATCTCTCAGATGACATTAGTAATTATTCTTATGTAGAGGTTTATACTAAACATAAGACAGCAGAGAAGACTAAAGGTAATGATGATTCAGGTACAATTTGTCATAAATTCTACTTGGATGGTAGTGGCACTTACGTCTGCTCAGGAACTTTTGTTTCAGGAGATAGAACAGATACAAAACCACCCGTTACAGAATTCTATAGAGTAGGTGTGTCCTTTAAAGGTTCAACCTGGACTCTTGTAGATAGTGCAGTACAAAATAGTAAAACACAATATGTTACACGAATTATAGGTATTAATATGCCATAG

Tertiary structure

PDB ID
30c552effd14c70a994aaa7328b6f3f48cd3d7eb48d036bb0478c6f59fbcfcb4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank