Protein

View in Explore
Genbank accession
QTJ24436.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKIYTENDKPTKAEIGLGNVTNDAQVKKAGDDMTGNLTLTNNASLTLPRRINFVSDNSSAVYTVATRSDNNAVTDPFPSSETRVYSLLVNTKSHTSDPAGGATLAAHLFNQKASGAGSMFIQVFGPPNKTTGASGSVTGQLLMNGENGQLQMTGSGLTIGMQTVVNGTMFAQQMAIKGDGNKNLFFQDAGGNELSLIYADTGKNLYVRTGGGAYATRFASDGTLVLANHLTVPGQATFNGLGVFNNRASVESDYATQGANTAILRVTTNGDGNAVGDGVTHLGYKDANGRYNHYFRGTGSTFINTKLGLNVNVPSYYNDVPQGTPAQYFLPTVGQGGKNYLRQFRGGNADTIWHETVQGGVWRLATGSTDAQEELQVSTAGYCRTRQEFQSTAVKGDGGQFRAVAGNYGFIIRNDGGNTYFLLTDSGDPYGSWGSLRPITISNGNGVVSITNGANINGSVSFGNAVNFNGTVETNGIGCGTANGLGTTGISLGDNDTGFKQEGDGILNAYANSQRIMRWTTGATANYKQLQVQGVNGPALLLNNTATNQSCYLLITLAGNNGAYFGFGGADDNVSVHNYRLNTTLQLRTSDLYMNRGLYVEGNVNANDVYIRSDIRLKSNLVELKDSLSKIEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDTDTGMLTISPSGINALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:744 AA
molecular weight: 78999,50920 Da
isoelectric point:5,73422
aromaticity:0,08065
hydropathy:-0,33871

Domains

Domains [InterPro]
IPR048390
428–475
IPR048390 IPR051577 Coil
G3DSA:6.20.80.10
571–630
G3DSA:6.20.80.10 IPR030392
IPR030392
647–742
IPR030392
QTJ24436.1
1 744
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage PF-CE2
[NCBI] 		2810367 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTJ24436.1 [NCBI]
Genbank nucleotide accession
MW629017.1 [NCBI]
CDS location
range 170598 -> 172832
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTTGGCGGTAATACTATCTGGAGTCAGGCGAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAATCTACACCGAAAACGATAAGCCAACAAAGGCAGAAATCGGATTAGGCAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGCGACGATATGACAGGCAACTTGACATTAACGAACAATGCTTCATTAACGCTCCCTCGTCGCATCAATTTTGTTTCTGATAATTCATCGGCGGTGTATACTGTTGCAACGCGTTCTGATAACAACGCAGTTACAGATCCATTTCCATCATCGGAAACTCGCGTATACAGTTTATTAGTTAATACCAAATCGCATACAAGCGATCCTGCGGGTGGTGCTACTTTAGCCGCACATCTGTTTAACCAGAAAGCATCCGGTGCTGGTTCGATGTTTATACAGGTATTTGGCCCACCTAACAAGACAACAGGTGCTTCTGGATCGGTGACCGGACAACTGTTGATGAACGGGGAAAACGGTCAACTACAAATGACAGGTTCCGGTTTAACGATCGGGATGCAAACTGTTGTTAATGGTACGATGTTCGCTCAACAAATGGCTATCAAAGGCGACGGAAACAAAAACCTGTTCTTCCAGGATGCTGGCGGTAATGAGCTTAGTTTGATCTATGCTGATACAGGAAAGAACTTATATGTTCGTACTGGTGGTGGTGCATACGCAACCAGATTTGCATCTGATGGAACTTTAGTTCTCGCTAACCATCTAACTGTTCCTGGACAGGCTACATTTAATGGTCTGGGTGTATTCAATAACCGTGCTTCCGTCGAAAGTGATTATGCTACTCAAGGAGCAAACACTGCAATACTTCGAGTAACTACAAACGGGGATGGAAATGCTGTTGGTGATGGTGTTACCCACTTAGGCTATAAAGATGCTAACGGAAGATATAACCATTATTTCCGTGGTACTGGTTCGACTTTCATCAACACCAAATTAGGTCTTAACGTAAACGTTCCATCATATTATAATGATGTTCCCCAGGGTACGCCAGCGCAATATTTCTTACCTACTGTTGGACAGGGCGGGAAAAACTATTTGCGTCAGTTCCGAGGCGGTAACGCGGACACAATCTGGCATGAAACTGTTCAGGGTGGTGTGTGGAGACTGGCAACAGGTTCTACCGACGCACAGGAAGAATTACAGGTTTCAACTGCTGGTTATTGTCGTACTCGTCAGGAATTCCAAAGCACAGCAGTAAAAGGCGACGGTGGACAATTCCGAGCGGTTGCTGGCAACTACGGTTTCATTATCCGTAATGATGGTGGTAACACTTATTTCCTTCTGACAGATTCAGGCGATCCATATGGTTCATGGGGTTCATTACGCCCTATTACAATCAGTAACGGTAATGGTGTTGTTTCTATCACAAACGGCGCGAACATTAACGGTTCTGTTAGCTTTGGCAACGCGGTAAACTTCAACGGCACGGTCGAAACAAACGGTATTGGTTGTGGTACTGCAAACGGATTGGGTACGACTGGTATTTCTCTGGGTGATAACGATACAGGTTTCAAACAGGAAGGTGACGGTATTCTCAACGCCTATGCAAATAGCCAGCGTATTATGCGATGGACTACTGGTGCAACTGCTAACTATAAACAGTTACAGGTTCAGGGTGTTAACGGGCCAGCATTACTTCTGAATAACACAGCGACTAACCAATCGTGTTATTTGCTGATTACTTTGGCAGGTAACAACGGCGCATACTTCGGGTTTGGTGGTGCTGATGATAACGTATCGGTACACAACTACCGACTGAATACAACCTTACAATTACGTACTTCGGATCTGTATATGAACCGTGGTCTGTATGTTGAAGGTAACGTAAACGCCAACGATGTGTATATTCGTTCCGATATTCGACTGAAATCTAATTTGGTTGAATTGAAAGATTCATTAAGCAAGATTGAACAGCTTAAAGGTTATATCTACGATAAGCAATCAAAAGATGCTGATGATATCGTATACCATCGCGAATCCGGTCTGATCGCTCAGGATGTTGAGAAGGTATTGCCGGAAGCAGTGCGCGAAGATACTGATACTGGTATGTTAACCATTTCACCTTCTGGGATCAACGCGCTTCTGGTTAACGCAATCAACGAACTGCGTGAACGTCTGGAAGCAATCGAAAACAAATTAGGGGCTTAA

Tertiary structure

PDB ID
9d26ccf13c8df1f6d52bed3c96699d533d8220a73ede9bf28c9a0d4a15bdb75f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6244
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of PF-CE2, a bacteriophage targeting Enterobacter sakazakii M1 Xiao,M., Ren,X., Yu,Y., Fu,X. and Mou,H. 2021-10-03 — GenBank