Protein

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Genbank accession
ARM70595.1 [GenBank]
Protein name
chaperone of endosialidase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,63
TF
Evidence Phold
Probability 1,00
Protein sequence
MKGYSFSELVKLAEAALPATGTAVAAQKLANARTIGGVYFDGTANINLPGVNIAGNQNTSGNAASATKLQNVRTIAGQAFDGTQNVVITPATIGASSLGHTHTPAEVGLGNLSNNPVSVNADPASYALRDGNGDLVARAFHGIHIGDGANLNNLQWGKLTGIPATASRWPTAAEAGASPALPINADFGGDSITIDTAQFIEMLRLMGAFGRGYWCCRGSWSYATNRYVNTGIGVIHLAGAIVEVWGSGSGNCTIRVVSATTTGGNGASPNYEWMYVDNGPTYQPGWRLGFNTATGVPWAALRDVPATATRWPSTAEIGALPAAGGTVTGSLTVNGVIVGNDRLVGIGKDNLYTGAGLEARTAIGSTADPSVGFHAAGRYAGTLRMLGDESFGFLDAENTRYSNLRVRDLIAVGKVDTPTIATQNIATGNASNVGWYRSVGDVGWYNETYGGGVYMRDSTYVRVYGGKQLAVESTASDSINTVGGVLADRYQTAGGGTVYNQRGDTTWMTSNSISTTHAGIGVQLGVGPMYWDGAATKSIWHSGNAPATATRWPTAAEVGLGNVANKGWNYGVAADTYAVRDGNGDLVARWMHAAEFYGSGTNLTNLQWSRLTGVPQTAVRWPTWAEVSGKPAEASQWISLLKNTSTTCVKEYILPPQMLNHLAAGGMIHLRVFLNQSGTAAGVRHCKETYIDGSDEWQSGTINIDLEWPGFSYLNIRNNSTGFAANLRNRIISQYPNIQRVDMRLL
Physico‐chemical
properties
protein length:746 AA
molecular weight: 78545,61970 Da
isoelectric point:6,87066
aromaticity:0,08847
hydropathy:-0,14651

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage SppYZU05
[NCBI] 		1970795 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM70595.1 [NCBI]
Genbank nucleotide accession
KY709296 [NCBI]
CDS location
range 51590 -> 53830
strand -
CDS
ATGAAAGGATATTCCTTCTCGGAGTTGGTAAAGCTTGCGGAAGCAGCGTTACCAGCGACAGGTACAGCAGTGGCGGCCCAAAAGCTGGCAAACGCACGTACCATCGGTGGAGTCTATTTCGACGGTACCGCCAACATAAACTTGCCAGGGGTAAATATCGCTGGTAACCAAAACACCTCAGGGAACGCGGCGTCCGCTACAAAGTTACAAAACGTGAGAACCATCGCAGGGCAGGCTTTCGACGGGACGCAGAACGTTGTTATTACTCCCGCCACTATAGGCGCCTCTTCGCTCGGGCACACGCATACCCCTGCGGAGGTAGGGCTCGGGAACTTAAGTAATAACCCTGTGTCTGTTAATGCCGACCCCGCCTCTTACGCGCTCCGTGACGGGAACGGGGACTTGGTAGCTAGAGCCTTTCACGGAATCCACATCGGGGATGGCGCGAACCTTAATAACCTGCAATGGGGGAAACTTACCGGAATCCCCGCTACTGCTTCTCGCTGGCCGACGGCTGCAGAGGCTGGAGCGTCCCCTGCGCTTCCTATCAACGCGGATTTCGGTGGTGATAGTATCACAATCGATACTGCGCAGTTCATAGAGATGCTTCGCCTTATGGGGGCTTTCGGGCGGGGGTACTGGTGCTGCCGCGGTAGCTGGAGTTACGCTACAAACAGGTACGTGAACACAGGGATTGGGGTAATCCACCTCGCGGGGGCAATAGTAGAAGTTTGGGGATCAGGAAGTGGCAATTGCACTATCCGCGTTGTTTCAGCGACTACTACAGGGGGGAATGGCGCGTCCCCAAATTACGAGTGGATGTATGTAGATAACGGCCCAACGTACCAGCCAGGCTGGAGACTTGGGTTCAACACCGCGACAGGCGTACCTTGGGCGGCGTTACGAGATGTCCCTGCCACCGCCACCCGTTGGCCATCTACAGCGGAGATCGGCGCGTTACCAGCAGCTGGCGGCACCGTAACAGGATCTCTCACTGTTAATGGCGTTATCGTCGGGAACGACAGACTCGTCGGGATCGGGAAGGATAACCTGTACACGGGAGCAGGACTAGAAGCACGCACCGCGATTGGAAGCACGGCAGATCCATCTGTAGGTTTCCACGCGGCCGGACGGTACGCAGGTACCCTTCGGATGCTTGGTGATGAGTCATTTGGGTTCTTGGACGCGGAAAACACGCGATACAGCAACCTACGGGTAAGAGACCTGATTGCCGTTGGGAAAGTTGACACGCCAACGATCGCCACGCAAAACATTGCTACTGGCAACGCAAGTAACGTTGGCTGGTACCGAAGCGTAGGAGACGTGGGGTGGTACAACGAGACTTACGGCGGCGGCGTCTATATGAGAGACAGCACGTACGTAAGGGTTTACGGCGGGAAGCAACTAGCCGTAGAGAGCACCGCAAGTGACTCCATCAACACGGTCGGAGGCGTTCTGGCTGACCGGTACCAAACCGCAGGTGGCGGGACAGTGTACAACCAACGTGGCGACACCACTTGGATGACGAGCAACAGTATCAGCACTACCCACGCAGGGATCGGCGTCCAGTTAGGTGTTGGCCCCATGTATTGGGACGGTGCAGCGACGAAGTCCATCTGGCATAGCGGCAACGCACCAGCAACTGCTACTCGCTGGCCGACAGCCGCGGAAGTCGGGTTAGGGAACGTGGCTAACAAAGGTTGGAACTACGGAGTCGCCGCAGACACATACGCAGTGCGGGACGGAAACGGGGACTTAGTTGCTCGGTGGATGCACGCGGCGGAATTCTACGGAAGCGGCACGAACCTAACCAACCTGCAATGGTCACGGCTCACTGGAGTTCCACAAACAGCAGTTCGTTGGCCTACATGGGCTGAGGTGTCAGGGAAACCCGCGGAGGCCTCTCAGTGGATTAGCTTGCTCAAAAACACGTCAACTACGTGCGTCAAAGAGTACATCCTACCGCCACAAATGCTGAACCATTTGGCCGCAGGAGGGATGATCCACCTCCGGGTGTTCCTGAACCAAAGCGGCACGGCCGCAGGGGTTAGACATTGTAAGGAAACCTACATCGATGGATCTGACGAGTGGCAGAGCGGGACGATCAACATTGACCTAGAGTGGCCAGGGTTCTCGTACTTGAATATCCGTAACAACTCTACGGGGTTCGCCGCAAACCTCCGAAACCGGATTATCTCTCAATACCCCAACATCCAGCGCGTAGACATGCGATTATTATAA

Tertiary structure

PDB ID
5d9778bdda3878266d060b01e4e340d03f7caadc4fc0b0746d2453d06ca7177e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5639
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of lytic bacteriophages infecting Shewanella putrefaciens and Shewanella baltica for biocontrol of fish and shrimp spoilage during chilled storage Yang,Z., Tao,X., Gao,L. and Rao,S. 2019-03 — GenBank