Protein

View in Explore
Genbank accession
YAO57849.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MWQIDGKDTDIKAEPELLDKINIANVEGLEDKLQEVEKIKDTTLNDSKTYTDTKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFERFKQSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERYLLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLYQKDPNTLYLIKG
Physico‐chemical
properties
protein length:194 AA
molecular weight: 22019,05100 Da
isoelectric point:4,68810
aromaticity:0,06701
hydropathy:-0,80619

Domains

Domains [InterPro]
Coil
26–46
Coil PF12789 IPR056923
YAO57849.1
1 194
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage EMS30
[NCBI] 		3463358 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO57849.1 [NCBI]
Genbank nucleotide accession
PX270300.1 [NCBI]
CDS location
range 21855 -> 22439
strand +
CDS
ATGTGGCAAATTGATGGTAAAGATACAGATATCAAAGCAGAACCTGAGTTATTGGACAAAATCAATATCGCAAATGTTGAAGGGTTAGAAGATAAATTGCAAGAAGTTGAAAAAATCAAAGATACAACTCTCAACGACTCTAAAACGTATACGGATACAAAAATTGCTGAACTAGTTGATAGCGCGCCTGAATCTATGAACACATTAAGAGAATTAGCAGAAGCAATACAAAACAACTCTATTTCAGAAAGTGTATTGCAACAGATTGGCTCAAAAGTTAGCACAGAAGATTTTGAGAGATTCAAGCAATCATTAAACAGTTTGTATGCAGATAAAAATCATAGTCATACAATCAAACAGATTGAAGGATTAGAAAATGCTTTATCAAAAAAATCAGACATAAATCACAGTCATGATGAACGTTATCTTTTATCATCAAATGCTTTTACAAAAGAGGAAGCAGATAAACTTTATCAACCTATCGGTTCTTCGCAGCCGTCACTGAATATTTGGACAGGCAGTGAAACAGAATATAATTATTTGTATCAAAAAGACCCTAATACACTTTACTTAATTAAGGGGTGA

Tertiary structure

PDB ID
54dfef5ea0c5edb36d96ab65bc1cec9782c22de3713e91694e1d069444e604f8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Evaluation of therapeutic efficacy of phages obtained from milk of cows with mastitis Dalgic,C., Tasdurmazli,S., Erdogdu,B. and Ozbek,T. 2003-09-01 — GenBank