Protein

View in Explore
Genbank accession
AIK68200.1 [GenBank]
Protein name
long tail fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVAKSFRATSGIDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTVQQYDPARGYSAFMAIIYARRIWYARADIASPAGAFDETKWISTRNDPKWVYNNVTSVDGLPVESGTYLMADGRFSELTYILPDAPVEGDIITIKDGGGMVGINSMLVRSNTRQIRLRDVQSSSYRLTHPYMTVAFIFNGNLWRVAEMLDNRDSQFVNATGAGSFQMQSGMTTFRNSGTGKITLQLPKYANDGDSITTYDLDKLSSVNVATLQVYPGSGHTITYDSINGVTSVASQRSGYGVFIFDQTNNRWVVYDGDNRVRLRRISDDLNMLPNDYVFVTPIAGNPPTIRNVTLTLPQDVAEGDRVYISMYMMGKTQNCTIKVKDGSGETIRTNKNMMQFPQRKDYPPDDWFSVTTLSFNADTDYLPYMELSYLKATKEWVVAQYRPLVERVDPTNRSRLGVIALATQAEVNKNLEDLPSDELAVTPRTLANKTATETRRGIARLATTAEVNQNTTATFLDDIIVTPKKLNERTATEDRRGILEIATQAETNAGTDDTTAITPKKLDTRRATETLAGIGKLVTTGATTAEGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKSKGLVVLATENEVITGAAAGSASMPIVVTPEMLHRKTSTEARIGLIEIATQTETNTGTDDTRAVTPKKLNDRKATETLDGIIALATTAEVAAGTVTNKAVVPVKLKEFFDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIRCATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNFALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNTYNGTSTFVGDVVTNGTLTANAAVTVNATVTTNNNINQSAKANTVYANTVLGTAAAGTKNLLRTFRGGTTDTTWHETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKTLANINANGDVTIASDASPTVQLRTAATNGWNGVTISNDNGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVNVSGTGGRFTSVSGTAHIQAGDFSGPIQKMRLTGINDQVLTEFNINITDYTKAMINGNLIYHAGRKPTPAEIGAVAVAGSTVDTLVVRNYIKIGNVKIYANPVTKTCEFEWEE
Physico‐chemical
properties
protein length:1219 AA
molecular weight: 130921,10450 Da
isoelectric point:5,80630
aromaticity:0,06891
hydropathy:-0,23142

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Miller
[NCBI] 		1527524 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter
[NCBI] 		544 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >
Host Citrobacter freundii
[NCBI] 		546 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Citrobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIK68200.1 [NCBI]
Genbank nucleotide accession
KM236237.1 [NCBI]
CDS location
range 163822 -> 167481
strand +
CDS
ATGGTAGCTAAATCATTCCGCGCCACAAGTGGCATTGATGCTGCTGGCGAAAAGGTTATCAACGTTGGTAAAGCATCCCGCTCTGTGTTGAGCGACGGCGTGAACGTTGACTTTTTTAACGAATTTAACACCGTACAACAGTACGATCCTGCTCGCGGTTATTCTGCGTTTATGGCTATCATATATGCGCGTCGTATTTGGTATGCTCGTGCGGATATTGCATCACCAGCAGGGGCTTTTGATGAAACAAAATGGATTTCAACCCGTAACGATCCGAAATGGGTTTATAACAACGTAACAAGTGTTGATGGTCTTCCCGTTGAATCCGGTACATACTTAATGGCTGATGGTCGTTTCTCTGAACTGACTTATATTCTGCCAGATGCACCAGTAGAAGGGGATATTATCACGATTAAAGATGGTGGCGGGATGGTTGGTATCAACAGTATGTTGGTACGTTCTAACACTCGTCAGATCCGTCTGCGTGATGTTCAATCCAGTTCTTACCGACTGACTCACCCATATATGACCGTTGCGTTTATTTTTAACGGTAACTTATGGCGCGTTGCTGAAATGCTAGACAATCGGGATTCACAGTTTGTGAACGCAACTGGTGCTGGATCTTTCCAGATGCAATCCGGTATGACTACATTCCGTAATAGCGGTACTGGTAAAATCACTCTTCAATTGCCGAAGTATGCAAACGATGGTGACTCCATCACAACTTACGACCTTGATAAACTGAGTTCGGTAAACGTTGCAACATTACAGGTATATCCTGGTAGCGGTCATACGATCACTTATGATAGCATTAACGGCGTAACCTCTGTTGCTTCACAGCGTTCCGGTTATGGTGTATTCATCTTTGACCAGACTAACAACCGCTGGGTTGTTTATGATGGTGATAACCGCGTTCGTCTGCGTCGTATCAGTGATGACCTGAACATGCTCCCGAACGATTATGTTTTCGTTACTCCGATTGCTGGGAACCCTCCAACTATCCGTAACGTAACATTAACCCTCCCGCAAGATGTTGCAGAAGGGGATCGCGTGTACATCAGTATGTACATGATGGGTAAAACACAGAACTGTACGATCAAAGTTAAAGATGGTTCCGGTGAAACAATCCGCACCAACAAAAACATGATGCAGTTCCCACAGCGTAAAGACTATCCACCTGATGATTGGTTTAGCGTGACTACGCTTTCGTTTAACGCAGATACTGACTATCTTCCATATATGGAGTTGTCTTACCTGAAAGCAACGAAAGAATGGGTTGTTGCACAGTATCGACCACTGGTTGAACGTGTTGATCCAACTAACCGTTCTCGTTTGGGTGTTATTGCGCTTGCTACTCAGGCAGAAGTAAACAAAAACCTGGAAGATTTGCCGTCTGATGAACTGGCAGTAACCCCGCGTACACTGGCGAATAAAACCGCTACTGAAACGCGCCGTGGTATCGCTCGCCTGGCGACGACAGCAGAAGTAAACCAGAACACTACGGCTACTTTTTTGGATGATATAATCGTAACGCCTAAAAAGCTGAACGAACGTACAGCAACAGAAGATCGTCGCGGTATACTGGAAATTGCTACTCAGGCAGAAACTAACGCTGGCACGGATGACACTACCGCAATCACGCCTAAAAAGCTCGATACGCGTCGTGCAACCGAAACCCTAGCAGGTATCGGAAAACTCGTCACCACGGGTGCTACGACTGCTGAGGGGGCTTTACGTGGGGATGCTGGTACTAACGTCTACAACTTCAATAACGGTGTTGATCTGATCACTCCGAAATCGTTGAACGAGAAGACAGCAACCGAGAAATCGAAAGGTTTGGTTGTGCTGGCGACGGAAAACGAAGTTATTACGGGCGCTGCTGCTGGATCTGCTTCAATGCCGATCGTAGTTACTCCTGAAATGTTACATCGTAAAACGTCTACTGAGGCGCGGATCGGTTTGATTGAGATCGCAACTCAGACAGAAACCAACACAGGAACCGATGATACTCGTGCGGTAACGCCTAAAAAGCTGAATGATCGTAAAGCGACAGAAACGCTTGATGGTATTATTGCACTGGCAACCACTGCGGAAGTTGCAGCGGGTACAGTAACGAATAAAGCGGTTGTTCCGGTTAAGTTGAAAGAGTTTTTCGACGTTGCTGGTCATATTGCTGTTGCAACTGCTGATGGTTTGACTCAATCCGGTACTATCTGGACTACGGTTAACCTGGGGATCGCGGCTGCTACTGAAACTCAACGTGGTACTTTGCGCGTTGCTACTCAGGCAGAAACAAACGCGGGTACTCTTGATACTGTTATCATCACTGCGAAGAAATTGCAAGCTAAAAAAGCTACCGACACAGCAGAAGGTATTATTCGCTGTGCAACGAATAGCGAAGCGGCTGCGGGTACTTCTACAAACCTGGCAATTACTCCGGCAACAATGCAGTATCTGAACGGTAACGATCCGGCGTGGGGTGCAACAACTACTCGTCGCGGTGCTGTATTCATTACCACTAAATCGAATACGTTCATTGGTGATAATCTGGTTGGTTCTACTCAACCTGTAGACAGTTACCTTGAAGATTTCTATGCTGTATCGCCTCGCGGTCTTAACTTTGCCCTGCAAAACTTCTTACCGAAAATGGCAACAGCACAGAATAGCTTGAGTCTGGGTGGTGTGGTTGCTGCAAGTTGGATGCGTCGTGATGCTGATCAAACCGTAACGGGGAACAACACGTATAACGGCACAAGCACTTTCGTGGGTGACGTAGTTACTAACGGGACGCTGACGGCAAATGCTGCTGTAACCGTTAACGCAACAGTGACAACGAACAACAACATTAACCAATCTGCGAAAGCAAATACGGTTTATGCGAATACTGTTCTGGGTACTGCTGCTGCTGGAACCAAAAACCTGCTTCGTACTTTCCGTGGTGGTACAACGGATACTACATGGCATGAAACGGTTCAGGGTTCAGTGTATCGCATGGCAACGGGTGCAACTGATTTGGTTGATGTTCTGACGGTTGGTGATGTTGGTAATGGTGTGCTGGCTTACTACGGTAATACATTGCGACTGAACAGCAAAACCCTGGCAAACATTAACGCAAACGGTGATGTTACTATTGCGAGTGATGCAAGCCCTACGGTACAATTACGGACTGCTGCAACTAATGGCTGGAACGGTGTTACCATCAGTAACGACAACGGGACAACCACAGCAACGGTGATCAACACCAGAAACTTTACCCAGCACCTTGACAGTACGTATGTCAACGTAACGGGTGATACCATGACGGGTGCGCTGTCTGTCAACGTTAGTGGTACTGGTGGACGCTTTACCAGTGTAAGCGGTACAGCACATATTCAGGCGGGTGATTTCTCTGGCCCGATCCAGAAAATGCGCTTAACGGGTATTAACGATCAGGTATTGACTGAGTTTAACATCAATATCACCGATTACACCAAAGCGATGATCAACGGGAACCTGATTTATCATGCAGGTCGCAAACCTACTCCGGCAGAAATCGGGGCTGTTGCGGTTGCTGGTTCGACAGTAGACACGCTGGTAGTTCGCAACTACATCAAGATCGGAAACGTAAAAATCTACGCAAACCCAGTCACTAAGACTTGTGAGTTTGAGTGGGAGGAATAA

Tertiary structure

PDB ID
4c9020c5c8e3c983d7e9d5ca50097b3de3c3498eac670baa7ca599f81bf8a1af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50