Protein

View in Explore
Genbank accession
YP_007006451.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MALRRDVTYSGRFTPATTERPQGGFKNRTSPTSEDGSYLEEQWLNDLDGFFGSLLNATNTTPNGNVDEAGNSQLFDAATQLFSQEWSENVNYSIGHEVARNNLRYIARAASGPDNGGAITPENNSGSTWDLVLPQAYSTTDTQTDWLRLALVVGDNNGAGDFLSLEVIGGSDFGVNTRFSADIMITERAGSAQVIVTPKTLGLTNPEFYIKSPSANTYELWMKRLTDLSSPVTVVRKSRSRYSATVAGILSITNTAPSGVTLVPYDTGYQFASIPIGMEVTFDTPPPTNDPRFRFVKLTYNDAYNTGLLTSQTLSGSAPELVSTAVISAAQSPINGQTIYLKNTMGVYAVPAVTQGIVAQNIPQPARYRIDSISPGVSLQTGPSISGFIISSASQEAQITGGLKPRSFGEVVYKRVY
Physico‐chemical
properties
protein length:417 AA
molecular weight: 44887,37140 Da
isoelectric point:4,97235
aromaticity:0,09113
hydropathy:-0,25204

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VchM-138
[NCBI] 		1127518 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007006451.1 [NCBI]
Genbank nucleotide accession
NC_019518.1 [NCBI]
CDS location
range 41136 -> 42389
strand +
CDS
ATGGCTTTAAGACGCGATGTTACATACTCGGGGCGATTTACGCCGGCAACTACCGAACGCCCTCAAGGTGGGTTTAAAAACCGCACATCACCTACTTCCGAAGATGGATCATATCTTGAGGAACAATGGCTCAACGACCTTGATGGATTTTTCGGTTCATTACTCAATGCAACAAATACCACACCTAACGGTAATGTGGATGAGGCGGGTAATTCTCAATTATTCGATGCTGCCACACAGTTATTTTCGCAAGAATGGTCAGAAAATGTTAACTACAGCATCGGCCATGAAGTTGCCCGTAATAACCTGCGCTATATCGCTCGCGCGGCGTCAGGGCCGGATAATGGCGGGGCTATTACTCCAGAGAATAACTCGGGTAGTACTTGGGACTTGGTTTTACCTCAAGCATATAGCACAACTGATACGCAAACAGATTGGTTACGGCTGGCTCTCGTTGTGGGAGACAACAACGGCGCTGGTGACTTTTTGTCATTAGAAGTGATCGGCGGCTCTGATTTTGGGGTAAACACAAGATTTAGCGCAGATATTATGATTACTGAACGGGCAGGTTCTGCACAGGTTATCGTTACCCCTAAAACTTTAGGATTGACTAATCCTGAGTTTTACATCAAATCACCAAGTGCTAACACTTACGAATTGTGGATGAAAAGACTAACTGATTTGTCATCACCAGTGACAGTAGTTAGAAAGTCACGCTCTCGTTATTCTGCAACGGTCGCAGGAATTCTAAGCATAACAAACACGGCTCCTTCTGGCGTCACATTGGTACCCTACGACACAGGCTACCAATTCGCCTCTATTCCAATCGGCATGGAAGTGACGTTTGACACGCCGCCGCCAACAAATGACCCGCGATTTCGCTTTGTTAAACTGACGTATAACGATGCTTACAACACAGGTTTGCTAACATCACAAACGCTTTCTGGTAGTGCACCAGAACTAGTTTCGACCGCTGTAATTTCAGCAGCGCAAAGCCCTATCAATGGGCAGACTATTTATCTTAAGAACACAATGGGTGTATATGCAGTGCCAGCAGTCACGCAAGGAATAGTGGCACAAAACATACCACAGCCCGCAAGGTACAGGATAGACAGTATAAGTCCTGGGGTCAGCTTGCAAACTGGCCCAAGCATCAGCGGTTTTATCATAAGTAGTGCATCACAGGAGGCTCAGATTACGGGCGGTTTAAAACCACGTAGTTTCGGTGAAGTCGTGTACAAGAGGGTCTACTAA

Tertiary structure

PDB ID
d1719553b38c7da02818a81695f2addd212cb73d7a084d5982cf88d8e2809970
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6205
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50