Protein

View in Explore
Genbank accession
AGH16166.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTLDHDAIKKAYPNATKIDDGEGVFDITGKEIVIDNSLVTAARTTLDNEASAILYQRQRTGIDGTTDTIYPDLGEQFDLLFKDIAAGTLTTSGNLYTALKAVKDKYPKPS
Physico‐chemical
properties
protein length:110 AA
molecular weight: 11956,24630 Da
isoelectric point:4,67543
aromaticity:0,07273
hydropathy:-0,35909

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage MED4-117
[NCBI] 		889954 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH16166.1 [NCBI]
Genbank nucleotide accession
JF974321.1 [NCBI]
CDS location
range 27633 -> 27965
strand -
CDS
ATGACTTTAGACCATGATGCAATAAAAAAAGCATATCCTAACGCCACAAAAATTGATGATGGCGAAGGTGTTTTTGATATTACAGGTAAGGAAATCGTAATTGATAATAGTCTTGTCACTGCTGCAAGAACAACTTTAGATAATGAAGCCTCTGCAATTCTTTACCAACGTCAAAGAACAGGGATTGATGGGACAACAGACACAATTTATCCTGATCTCGGTGAACAATTTGATTTACTATTTAAAGACATCGCTGCGGGTACTTTGACAACCTCTGGAAATCTATACACAGCCCTAAAAGCCGTAAAAGACAAATATCCAAAACCAAGTTAA

Tertiary structure

PDB ID
ee2bfe3ac711ec4940605ccc06b979db4ac61db36bb7d8e2d69dfcdb7e75f83b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50