Protein

View in Explore
Genbank accession
AIX28171.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSNLNTVNVSAGKINATGLITTSSGLELPVYDSADRPDDSETGTLIWNRGDDGVVNIKTNTGWLNISGGTGSVWTTTTRPTTPPVGTYAWNTENNSLEVYDGTNYVKVLQDVSGGAGGTTKGTAADPAISAQEIYNLNGAQPADGLYYINTPNGGSQQIYCVFDNGVGWMVVGKFNGDASSTVTNTITTTRGLTVQDSTGTEFSADFGDFNPSLQRFIGCNNISTWRNDRNLDWWYGVPTNRLWKNFWTNGRSSGMDNVRRYGFTTAGAWDGRGRWANPNYTFYQMSDGNTDIQTSDFTNSGSFNLHGASDAKFGADAFDSTSGQDTEVMVQFGNDDGRRCFIDRFPDRDGGNSNRRDYSTAVYCLIH
Physico‐chemical
properties
protein length:368 AA
molecular weight: 39989,81770 Da
isoelectric point:4,53896
aromaticity:0,11413
hydropathy:-0,58940

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014a
[NCBI] 		1493507 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX28171.1 [NCBI]
Genbank nucleotide accession
KJ019088 [NCBI]
CDS location
range 31733 -> 32839
strand +
CDS
ATGTCAAATCTTAATACTGTAAATGTTTCTGCTGGTAAAATTAATGCCACAGGTCTAATTACTACCAGTTCAGGATTAGAACTACCAGTCTATGATAGTGCAGATCGTCCTGATGATTCTGAAACTGGAACTCTAATCTGGAATAGAGGTGATGATGGAGTTGTTAATATCAAAACTAATACTGGTTGGTTAAACATTAGTGGTGGTACTGGTTCAGTTTGGACAACTACAACTCGTCCTACAACTCCACCAGTAGGAACATATGCTTGGAATACAGAAAATAATTCGTTAGAAGTATATGATGGCACGAATTACGTTAAAGTTCTGCAAGATGTTTCTGGTGGTGCTGGTGGCACTACTAAAGGTACAGCAGCAGATCCAGCAATTAGCGCACAAGAAATTTATAATCTAAATGGCGCACAACCTGCCGATGGTCTTTATTATATTAACACACCAAATGGTGGTTCTCAACAGATTTATTGCGTTTTTGATAATGGTGTTGGGTGGATGGTTGTTGGTAAGTTTAATGGCGATGCCTCTTCAACAGTCACGAACACTATTACTACCACTAGAGGATTGACAGTTCAAGATTCTACTGGTACTGAATTTTCTGCTGACTTTGGTGATTTTAATCCTTCATTACAAAGGTTCATTGGATGTAATAATATCTCCACTTGGCGAAATGATAGAAATCTAGATTGGTGGTATGGTGTTCCTACTAATCGTCTTTGGAAAAACTTCTGGACGAATGGAAGATCCTCAGGTATGGATAACGTAAGGCGTTATGGATTTACTACTGCTGGAGCATGGGACGGTCGTGGCAGATGGGCAAATCCTAATTATACATTCTATCAAATGTCTGATGGTAATACTGATATACAAACATCAGATTTCACTAATTCAGGATCATTCAATCTTCATGGTGCCAGTGATGCTAAGTTTGGTGCTGATGCGTTTGATTCAACATCAGGACAAGATACAGAGGTGATGGTACAATTTGGTAATGATGATGGTCGCCGTTGTTTTATTGATAGATTCCCAGATAGAGATGGAGGCAACTCAAATAGAAGAGACTACAGCACCGCTGTATATTGCTTAATCCACTAA

Tertiary structure

PDB ID
a99162e437c2b5e3d186843c57baec2da6207bb66ca02e842f582ea206e32280
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank