Protein

View in Explore
Genbank accession
AGG58284.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MPVVIPYIAIALSVASAIYAASLDLSPTADPTDTGTLINKSGTRATRDVVYGRCLTGATSLWSNVNDSSTNELIQVFSTGIAVSEIHQLYIDNVEVLVEKSYRETTDTSSLILSGEADLVNGFEKQCTIQLRTGFPIGAPMNGDLPIGTPMQLAIDNSDGEWTDKMRGDYTSMVAIKSKRIIDDEAIRIMSESYAVNLEVSGVPVFDPRVGSNPAVKSYSRNPALCALDYITNSYYGMGIGFDKVDTDSFVTAANHCDVNKFYIDGQLNQGESFASNLENICSTAQLHLFIENGKLVCRVETVAMSSWSFNEDNILKGTLRVTEQTSASYANVISVNYKNSELDDKEDVFTVPENIYPVQSDPSYPTKPQVDGYIATTELNMPMTRYIGSNANDANSPMKKFANIELLRQDFQKEIEFDIDREEYNVSVFDVIEISDSGIGWVNKQFRITGFATRISETDMNIVTLKCKEYSSTIYNGNMDGTPPSTKPTPPIEVTPPTNLTFTLQDLIISGSATLSWDRTWFESNVQYDIDYKRSSSSTWTRVGRSSTNEWKFPNLYPDTYDFRVATWSNLYGSSNFTQLTGVIISQLGAFPSVTGLECDTTTQDFKWTWDDMLNSSVVLPSDPRPDAPTNPIVRDYFSHYQVDILDGSTLIDSYQATTNLYDYTYTTNINNGILRTIRANVYIVAKDGTKSQIGSGSDLTATNPQQSAPTGIVTSTELSNTIITWDQPSDFSDYRATRFYQSTTKGFSPSQSNFLKEQVGTLFSHIWADKNVHYIRFAHVDVFGNDSASYSHEIAVTPSTIDALLPIDPDFAEIRDPQGAVGKEQVLKAADGEYVSGIGIYADNPSKSTKILMAAEQILMGVGGRPFYKSSTAYRVGDKVLYKRTSTITALYECKVANTGNAPTNTTYWNVLQSNADQTVFAVDESGKVLIRNAVISDLTSDNIKSRSIVADDIATNTITANEIAGNTITGSKIKSTTTIIAGSGSTSAGMNGDDSTSSSYKNYRFWSGAALPASAPFRVSRTGKLTATGVDISGELNATSGVMDNVTVNKTCTVLGTIQANQIVGDIVSGITKTNTAASVNVTQYEDETWSRTSSFGSVTIANARGWDRTLVVTLHIEINENSGEAYGAGRMRLFVSGSSGGSDYYSRQYNGDEKETTRSRVYTLGADVTMVIPIAKNTTPKFTFYAEGARKQGRSYNFDVSVSAPQSNNLWCAYLISNGGDLS
Physico‐chemical
properties
protein length:1227 AA
molecular weight: 134138,43960 Da
isoelectric point:4,73596
aromaticity:0,09372
hydropathy:-0,29267

Domains

Domains [InterPro]
IPR013783
496–581
IPR013783
IPR036116
497–581
IPR036116
IPR003961
497–580
IPR003961
IPR003961
497–590
IPR003961
AGG58284.1
1 1227
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage henriette 12B8
[NCBI] 		573174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG58284.1 [NCBI]
Genbank nucleotide accession
HQ316582 [NCBI]
CDS location
range 75640 -> 79323
strand -
CDS
ATGCCAGTAGTAATTCCTTATATTGCTATAGCTTTATCGGTGGCTAGTGCAATATACGCAGCATCATTAGATCTGTCTCCTACAGCAGACCCAACCGATACGGGTACGCTAATAAACAAATCTGGTACACGAGCAACGAGAGATGTAGTTTATGGTAGATGTTTGACCGGAGCAACCTCATTGTGGTCCAATGTGAACGATTCGAGTACCAACGAGCTTATACAAGTATTCTCTACTGGTATAGCAGTATCCGAAATCCATCAATTGTATATAGATAACGTAGAAGTTCTAGTAGAAAAATCATATAGGGAAACTACAGACACATCTTCTCTGATACTATCAGGTGAAGCAGACCTAGTTAATGGTTTCGAAAAACAATGTACAATACAGCTACGCACAGGATTCCCGATTGGTGCACCAATGAACGGAGACTTACCAATCGGTACACCTATGCAGTTGGCTATAGATAATTCTGATGGTGAGTGGACCGACAAAATGCGAGGCGATTATACATCAATGGTGGCGATTAAATCGAAACGTATTATCGACGACGAAGCAATCAGGATAATGAGCGAGAGTTATGCGGTTAACCTAGAAGTATCTGGTGTTCCTGTATTTGACCCAAGGGTTGGTAGCAATCCAGCAGTCAAGTCTTATAGTCGCAACCCAGCATTATGTGCATTAGATTATATCACAAACTCATACTACGGTATGGGCATCGGTTTTGATAAAGTTGATACAGACAGTTTTGTTACGGCAGCAAATCATTGTGATGTAAATAAATTCTATATTGATGGTCAATTAAATCAGGGCGAATCTTTCGCATCAAACTTAGAAAATATATGCAGTACAGCACAATTACATTTATTTATAGAGAATGGAAAATTGGTATGTAGAGTTGAAACTGTTGCTATGTCTAGTTGGTCGTTTAATGAAGACAATATACTGAAGGGTACTTTACGAGTAACCGAACAAACATCAGCATCATACGCTAACGTGATATCAGTAAACTACAAAAACTCTGAATTGGATGATAAGGAAGATGTGTTCACCGTACCAGAAAATATATACCCAGTACAAAGTGATCCTTCATACCCAACAAAACCACAAGTTGATGGGTATATAGCGACGACCGAACTAAACATGCCGATGACTCGATATATTGGGTCTAACGCAAATGACGCTAATTCGCCAATGAAGAAATTTGCTAACATCGAGTTGCTCAGACAAGATTTTCAGAAGGAAATCGAATTTGATATAGATAGAGAGGAATATAATGTATCTGTATTTGATGTGATAGAAATATCAGATTCTGGTATTGGGTGGGTCAATAAACAATTTCGTATAACTGGATTTGCCACAAGAATATCAGAAACTGATATGAATATAGTCACTTTAAAATGCAAAGAATACAGCAGCACAATATATAACGGAAATATGGATGGTACACCACCATCAACAAAACCAACACCACCAATCGAGGTAACGCCACCAACTAACCTAACATTCACATTACAAGACTTGATAATATCTGGTAGCGCAACGTTATCTTGGGATAGAACTTGGTTTGAGTCTAACGTACAATATGACATTGATTATAAACGTTCCAGTTCGTCGACATGGACTAGGGTTGGTAGATCTTCAACTAATGAGTGGAAATTTCCGAATCTATACCCAGACACTTATGACTTTCGGGTAGCAACTTGGTCGAACCTATACGGGTCATCAAACTTCACTCAACTGACTGGTGTAATAATCAGTCAATTAGGTGCTTTCCCATCAGTTACTGGCCTCGAATGTGACACAACAACTCAAGACTTCAAATGGACTTGGGATGATATGTTAAATTCGTCGGTTGTTTTGCCATCAGATCCTAGACCTGATGCGCCAACTAATCCAATAGTGAGGGATTACTTTAGTCATTATCAAGTTGATATATTGGATGGTTCTACGTTAATTGACTCATACCAAGCAACTACCAACCTATACGACTACACATACACAACAAACATAAATAATGGTATACTGCGCACAATTAGAGCTAATGTTTATATAGTGGCTAAGGATGGAACTAAGAGCCAAATAGGATCAGGCTCAGACCTAACCGCAACAAACCCACAACAATCAGCACCTACTGGTATCGTTACATCAACCGAACTAAGCAATACAATAATCACTTGGGATCAACCTAGCGATTTTTCTGACTATAGAGCAACTAGGTTTTATCAAAGTACGACTAAGGGTTTTTCACCAAGCCAGTCAAACTTCCTTAAGGAGCAAGTTGGCACATTATTCAGCCATATATGGGCAGATAAAAATGTGCATTATATTAGATTTGCTCACGTTGATGTATTCGGTAATGATTCCGCGTCATATTCGCATGAAATAGCAGTGACTCCATCCACTATAGATGCTCTACTTCCCATAGATCCAGATTTTGCTGAAATCCGTGATCCGCAGGGTGCTGTCGGAAAGGAGCAGGTACTTAAGGCTGCTGATGGTGAATATGTTTCTGGTATAGGGATTTATGCAGACAATCCATCAAAAAGTACCAAAATATTGATGGCGGCAGAACAAATCCTTATGGGCGTTGGTGGTAGACCGTTTTACAAATCGAGTACAGCTTATAGAGTTGGTGATAAGGTATTATACAAAAGAACATCAACGATTACTGCGTTGTATGAATGTAAGGTAGCAAACACAGGCAACGCCCCAACAAACACAACTTACTGGAATGTATTACAATCAAACGCAGATCAGACCGTATTTGCTGTAGATGAGTCTGGTAAAGTTCTGATACGCAATGCAGTAATATCAGATCTAACATCAGATAACATTAAGTCCAGATCTATTGTTGCTGATGATATAGCAACCAATACAATAACGGCAAATGAAATAGCGGGTAATACCATAACTGGTTCAAAAATAAAATCAACTACTACAATAATTGCTGGTAGTGGTTCAACTAGTGCAGGGATGAATGGTGATGACAGTACCAGCTCATCTTATAAAAATTATCGATTTTGGTCCGGTGCTGCGTTACCCGCTAGTGCTCCTTTTAGAGTTAGTAGAACAGGTAAACTTACTGCCACAGGAGTTGATATTAGTGGTGAACTTAATGCCACTAGTGGTGTAATGGATAACGTAACAGTAAACAAAACGTGTACAGTACTGGGAACGATACAAGCAAACCAAATAGTTGGTGATATTGTGTCAGGTATAACCAAAACCAACACAGCGGCATCAGTTAACGTAACTCAGTATGAGGATGAAACATGGAGTAGAACATCATCGTTTGGTAGTGTCACTATAGCAAATGCACGAGGTTGGGATAGGACTTTGGTAGTAACTCTGCATATAGAGATAAACGAAAATTCTGGTGAAGCATATGGTGCAGGACGAATGCGTTTATTCGTTTCTGGGTCTTCTGGTGGTTCTGATTATTATTCTCGACAATATAATGGCGACGAAAAGGAAACTACTAGGTCTAGGGTGTATACATTGGGTGCAGACGTAACCATGGTTATCCCTATAGCAAAAAACACGACACCAAAATTCACATTCTATGCTGAAGGTGCAAGAAAACAGGGCAGATCGTATAATTTCGATGTGTCCGTTAGTGCCCCACAATCCAATAATTTGTGGTGTGCGTACTTGATATCTAATGGTGGTGACTTGAGTTGA

Tertiary structure

PDB ID
d5c79e2b7c659335c79e4800bfafd29f9093761b7d151452d418401659132050
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6917
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage henriette 12B8 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank