Protein

View in Explore
Genbank accession
CAB4185082.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MASLEITLSYGYPQGSIVASLGVPGQRGEKGDKGDQGDQGIQGIQGIQGIQGIQGEKGDKGDQGDPGAGIIPGGTTGQALVKASSDDYDTEWANVSSADKLPLAGGTMNNNVSIFLPTLSGSMGYVNGTTIGVNNTSDPVLNSGINYDLIFSQNHDGAMQLVPTGLIFPDSTTQTTASNAATFTAPLSLDAETKAVSIDPNGTIIISAIEASQITAWDGVAGQFSLLTKGGVNFQNGFNTASLSNADHSLEIFNYSTNKRVKLRTDTGLTFPDATVQATKGLIPASNLSDVPNKPTARTNLGLGTMAVEPTTNWLSKAGNLSGLASTSTARTNLGLGSIATYASSDYAVTARGLPAGGTTAQALVKSSGTDYAVAWDTLQLGDRYLSASTTSMSVSNGNKTFTIATGLAYTTQQDVTIAYDAAHHMHATVISYNPSTGVMVADVSQHSGTGTYSLWTINVGGIASSVIPAGGTTGQVLAKASGADFDVSWVTGGGGGGGTWGSITGTLSDQTDLQSALDGKLSLAGGTMTGAIVFDGTSGQYISKGNFDTSRGGNYGISLVCSIGYEFNWQAGWLTTTNQGSTTPRPLYLDSLAGTTLRAWNSATDLGTEVSHTGITFPDATVQTTAGIEEAPMNDQPYVRFNGVWIVPPYSYVGRGSIMIGTDIINTSSWYGTIFYLGRNGNVIANLDDFGNEFYIGGSSGYDKSSSTYLSLSQLTLVNLFWFERSLATSPPQTYNWASLSNVYMTYNSFEIAPNFGGCDLITLVLDYNAYMATAPYFTNTSSLYQVSMLECSVSSSELLSCLSQIYNLGGAANNGYFDCSGGTNGALDPAATEITQLQDAGWTVVFNSI
Physico‐chemical
properties
protein length:851 AA
molecular weight: 88534,68970 Da
isoelectric point:4,35088
aromaticity:0,08931
hydropathy:-0,08331

Domains

Domains [InterPro]
IPR008160
22–68
IPR008160
G3DSA:1.20.5.320
40–98
G3DSA:1.20.5.320
CAB4185082.1
1 851
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4185082.1 [NCBI]
Genbank nucleotide accession
LR797073 [NCBI]
CDS location
range 25435 -> 27990
strand +
CDS
ATGGCTTCCCTCGAAATTACTCTTTCTTACGGATACCCTCAAGGGTCGATTGTCGCCTCGCTCGGCGTTCCCGGACAGCGGGGCGAAAAGGGCGATAAGGGTGACCAAGGCGACCAAGGTATCCAAGGTATCCAAGGCATCCAAGGTATCCAAGGTATCCAAGGCGAAAAGGGTGACAAGGGCGACCAAGGAGATCCCGGAGCCGGAATAATCCCCGGCGGGACGACCGGGCAAGCATTGGTCAAAGCATCCTCGGACGATTATGACACCGAGTGGGCAAACGTATCCTCGGCGGACAAGTTGCCGTTGGCTGGCGGGACGATGAATAACAATGTGAGCATTTTCCTTCCCACCCTCTCCGGGTCGATGGGTTATGTTAACGGAACCACGATTGGTGTAAATAATACCTCAGACCCGGTATTAAATTCTGGCATCAATTATGACCTTATTTTTTCACAAAACCACGATGGAGCGATGCAACTTGTCCCCACCGGGTTGATTTTCCCGGACAGCACGACCCAGACCACGGCATCGAACGCCGCTACATTTACCGCGCCGCTTTCATTGGATGCCGAAACCAAAGCGGTTTCTATCGACCCCAACGGAACGATTATCATTTCCGCCATTGAAGCGTCTCAGATCACGGCTTGGGATGGGGTTGCCGGGCAATTCAGTTTATTAACAAAAGGTGGAGTTAATTTTCAAAATGGATTTAATACTGCATCACTTAGCAACGCAGACCACTCACTTGAAATCTTTAATTACAGCACAAATAAGCGCGTCAAACTTCGCACCGATACCGGGTTGACCTTCCCGGACGCAACCGTCCAAGCCACGAAGGGACTCATCCCGGCGAGCAATCTTAGCGATGTGCCGAACAAGCCAACGGCTCGGACGAACCTTGGGCTTGGAACGATGGCGGTTGAGCCAACCACTAATTGGTTAAGCAAAGCCGGAAACCTCTCCGGCCTCGCTTCGACATCTACGGCTCGAACGAACCTTGGACTTGGAAGCATCGCCACTTACGCTTCGAGCGATTATGCTGTGACCGCGCGTGGCCTCCCCGCTGGCGGGACGACCGCACAAGCATTGGTCAAGTCATCTGGGACGGATTACGCTGTGGCATGGGATACGCTCCAACTTGGCGACCGTTATTTGAGCGCGTCAACGACCTCAATGTCGGTGAGCAACGGAAACAAGACTTTCACCATCGCCACAGGGTTGGCCTATACGACTCAGCAAGATGTGACCATTGCTTATGATGCGGCACATCATATGCACGCCACGGTCATCAGTTATAACCCAAGCACCGGGGTCATGGTGGCGGATGTCTCGCAACATAGCGGGACAGGGACATACTCGCTTTGGACAATCAATGTCGGCGGGATTGCTTCGTCCGTTATCCCTGCGGGTGGAACCACCGGGCAGGTATTGGCAAAAGCATCGGGGGCGGATTTCGATGTCTCTTGGGTGACAGGTGGTGGGGGCGGGGGCGGGACTTGGGGAAGCATCACCGGGACGCTTTCCGATCAAACGGATTTGCAAAGCGCGCTTGATGGCAAGTTGTCTTTGGCTGGCGGGACGATGACCGGGGCAATCGTCTTTGACGGCACTTCGGGTCAATATATCAGCAAGGGCAACTTCGATACCTCGCGCGGCGGCAACTATGGCATTAGTTTGGTTTGCTCGATTGGTTATGAGTTTAATTGGCAAGCGGGTTGGTTGACGACCACCAATCAAGGTTCGACTACCCCTCGTCCGCTTTACCTCGACTCGCTTGCTGGAACGACCCTCCGGGCTTGGAATAGTGCAACGGATTTGGGAACGGAAGTTAGTCATACCGGCATAACCTTCCCAGACGCTACGGTGCAGACTACGGCGGGAATTGAAGAAGCACCGATGAATGACCAACCTTATGTAAGGTTTAACGGAGTTTGGATTGTTCCGCCTTATAGTTATGTTGGTCGTGGAAGTATAATGATTGGAACGGATATTATTAACACCTCAAGTTGGTATGGCACGATATTTTATCTTGGACGAAATGGAAACGTCATTGCTAATTTAGATGATTTTGGAAACGAATTTTATATCGGAGGTTCTTCTGGATATGATAAATCCTCATCTACTTATCTTTCCTTGAGTCAATTAACCCTTGTTAATTTATTTTGGTTTGAACGTTCTCTTGCGACAAGTCCTCCACAGACTTATAATTGGGCTTCGCTTAGTAATGTTTATATGACTTATAACAGTTTTGAAATTGCACCCAATTTTGGTGGGTGTGATTTGATTACTCTCGTGTTGGATTATAATGCATACATGGCAACCGCTCCATACTTTACGAACACATCGTCGCTATACCAAGTATCAATGCTTGAATGTTCTGTTTCATCTTCCGAATTACTTTCGTGCTTGAGTCAGATTTACAACCTTGGTGGCGCTGCAAATAATGGTTACTTCGATTGCTCTGGCGGAACCAACGGTGCGTTAGACCCCGCCGCCACCGAAATCACTCAACTCCAAGACGCAGGGTGGACGGTCGTATTTAACTCCATCTAA

Tertiary structure

PDB ID
59818206da9d2ab47dcb78f0b08ecdaf3ee70e02c3281611897371d37ca620e4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50