Protein

View in Explore
Genbank accession
QVW27276.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQVARGINLAVIDGTTLALLDYKAFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIKSDDNFLATMRKIGSVAWPETRFFNIPITTTNYSHRSSYSAIYSSTMKKICMENFVGGAGSLKDNTTSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGDLYGFHLYGLWGIGSDVYQGDIFKFTGELYCSQELRDAGGEVHLYMWTENSIRQWTSSSTLRTTGLAPDQWHSLSGYFTIPNDAVNVRMGSRVYHYPSTVKVGLAQCRNVQITKVPREEINRNGAAVGVNGVRMQTLSEVDASGNENPIDKLLSLPVSPTGVASDKKIISHNFAELDYIVSDPVEYTSTNTAEYQFKEWTATRQAEVTKASLSSYGLKAGDTIRMQCQMKRDANAIANNKGAYIVMQFWDANNTYITGINMLDVGTIPNVYSFYKNEGVIPAGAVTFDFGLYRYPSNTNIGTVSAKDVKLSIVR
Physico‐chemical
properties
protein length:530 AA
molecular weight: 58582,04920 Da
isoelectric point:5,33948
aromaticity:0,10943
hydropathy:-0,22132

Domains

Domains [InterPro]
PS52031
24–205
PS52031
IPR039477
62–132
IPR039477
QVW27276.1
1 530
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage JC03
[NCBI] 		2831170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW27276.1 [NCBI]
Genbank nucleotide accession
MW767161.1 [NCBI]
CDS location
range 34388 -> 35980
strand -
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAATGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATTAACGGGGCTGATATTATAAACAGACGAACACAAGTTGCTCGCGGAATTAACCTGGCTGTCATTGATGGAACAACTTTAGCATTATTGGATTACAAGGCATTCGATATGTATGGTGATCCTGCTACGAACGGGAATGCGATTAAAGACTACCTGAATTCACTTCCAGCGAACAGAATTGTGTGTTTTTATACTTTCGATGCTATCAAAAGTGATGACAACTTTTTAGCAACAATGAGGAAAATAGGTTCTGTTGCGTGGCCTGAAACTCGGTTCTTTAATATCCCGATCACCACAACCAATTATTCTCACCGTTCATCCTATTCAGCTATCTATTCATCTACGATGAAAAAGATTTGCATGGAAAACTTTGTCGGTGGTGCTGGTAGCTTGAAAGATAACACAACGAGTTTTGTTGAAGTTGTTTTTGATGAATTCAGTGATATCGGGGTAACGGGTATTCCAGAAAGAATGGTTGATGATGTCCAGACATACCAGAACAGCGGGGATCTGTACGGCTTTCATCTTTACGGGTTGTGGGGTATCGGTAGCGATGTTTACCAGGGAGACATCTTCAAGTTTACTGGGGAACTGTATTGCTCACAAGAACTTCGCGATGCTGGCGGTGAAGTGCATCTGTATATGTGGACTGAAAACAGTATTAGACAATGGACAAGTTCATCTACTCTTAGAACAACTGGACTCGCCCCCGATCAGTGGCATTCTCTATCAGGATATTTCACTATCCCAAATGATGCAGTAAACGTTCGTATGGGTTCGCGGGTATATCATTATCCGTCAACCGTTAAAGTCGGGCTGGCACAATGTCGCAACGTACAGATCACGAAAGTACCGCGCGAAGAAATAAACCGTAATGGTGCTGCTGTTGGTGTGAACGGTGTTCGAATGCAGACACTTTCCGAAGTGGACGCAAGCGGAAATGAGAACCCGATTGATAAATTGCTTTCTCTACCCGTTTCGCCTACTGGTGTTGCAAGTGATAAGAAAATCATTTCGCATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGGTTGAATATACTTCGACAAACACAGCGGAGTACCAGTTCAAAGAATGGACTGCTACACGGCAAGCGGAGGTAACGAAAGCATCACTAAGCAGTTATGGATTAAAAGCGGGTGATACGATCCGTATGCAATGCCAAATGAAACGCGATGCAAACGCAATCGCCAACAATAAAGGCGCATATATCGTAATGCAGTTCTGGGACGCGAATAATACGTATATCACAGGGATCAACATGCTTGATGTTGGCACGATCCCGAACGTATATTCATTCTACAAAAACGAAGGGGTTATTCCTGCTGGTGCTGTTACGTTTGATTTCGGTTTATATCGTTATCCAAGCAACACAAACATCGGCACTGTATCCGCTAAAGATGTTAAACTGTCAATCGTGAGATAA

Tertiary structure

PDB ID
d8ddb325133a73eec8c5a97d79b6a97eae0d523688e913644b5e436d0775699e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6446
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome analysis of a novel phage JC03 infecting Cronobacter sakazakii Jiang,J., Zhao,C., Li,Z. and Xu,C. 2024-11-20 — GenBank