Protein

View in Explore
Genbank accession
AFV50682.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDRPDMESLDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKMLYRFVSGNSSSEWQFIQGLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTSWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTSPSHKELWTGAQSFLSTGTTKNLSDDISNYSYVEVYTKHKTTEKTKGNDDTGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPITEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50467,79050 Da
isoelectric point:6,01961
aromaticity:0,09607
hydropathy:-0,41354

Domains

Domains [InterPro]
IPR057110
337–458
IPR057110
AFV50682.1
1 458
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage JD007
[NCBI] 		1239383 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 Bacteria > Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV50682.1 [NCBI]
Genbank nucleotide accession
JX878671 [NCBI]
CDS location
range 2433 -> 3809
strand -
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACCGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCTTATGGAAACATAACAGCCCTTAGAGATATAAAAGAACCTGGTTATTACTATATAGGTGCTAGAACATTAGCAACATTATTAGATAGACCTGATATGGAATCTCTTGATGTTGTTTTACATGTAGTACCTCTTGATACTTCTAGTAAGGTAGTTCAACATTTATATACACTATCTACTAACAATAACCAAATTAAAATGTTATATAGATTTGTCTCAGGGAACTCTAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATATCGGGCACTAATATTCTAGATATAGCTTCACCAGGTGTTTACTTTGTTATGGGAATGACAGGAGGAATGCCTAGTGGAGTAAGCTCCGGATTTTTAGACTTAAGTGTAGATGCTAATGATAATAGATTAGCTAGACTAACTGATGCTGAAACTGGTAAAGAATATACTAGCATTAAGAAACCTACAGGAACATACACATCTTGGAAAAAAGAGTTTGAGCCAAAAGATATGGAGAAATATTTATTAAGTAGTATTAGAGACGATGGCAGTGCATCATTTCCACTACTAGTTTATACTAGTGATAGTAAAACATTTCAACAAGCTATTATAGACCATATAGATAGAACAGGTCAAACAACCTTTACTTTCTATGTTCAAGGCGGTGTATCTGGTTCCCCTATGTCTAATAGTTGTCGAGGGTTATTCATGTCAGATACACCTAATACTTCTAGTTTACATGGTGTTTACAATGCTATAGGTACAGATGGTAGAAATGTAACAGGTTCAGTGGTAGGTAGTAATTGGACTTCACCAAAAACATCCCCTTCTCATAAAGAATTATGGACAGGAGCACAATCATTCTTATCTACAGGAACTACTAAGAATTTATCAGATGATATTAGTAACTACTCTTATGTAGAAGTTTATACTAAACATAAAACAACAGAGAAGACTAAAGGTAATGACGATACAGGAACTATATGTCATAAGTTTTATTTAGATGGCAGTGGAACTTACGTTTGTTCAGGTACATTTGTTTCCGGGGATAGAACCGATACAAAACCACCTATCACGGAGTTTTATAGAGTAGGTGTATCTTTTAAAGGTTCTACATGGACTCTTGTAGATAGTGCAGTACAAAATAGTAAAACTCAATACGTTACAAGAATTATAGGTATTAATATGCCATAG

Tertiary structure

PDB ID
746b28ce8b274fa243bea613c2443eff3f2ee28ff6267f61d8709ee429d10592
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Wide-Host-Range Staphylococcus aureus Phage JD007 Cui,Z., Song,Z., Wang,Y., Zeng,L., Shen,W., Wang,Z., Li,Q., He,P., Qin,J. and Guo,X. 2012 23166274 GenBank