Protein

View in Explore
Genbank accession
ALJ97535.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MPNIMKPTGINAIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGIIYKCLRTHSDKIPTDPLNITAGYWRVAFEDAGEAAKVQANLDRHVTNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMKHGNGSNVFSVATATQPTHAIPLSQLSTLVPPATETVAGVMAVATTIETEAGANDTKAVSPLKAAQVYLKKKDNLSGLSNVTAARANLGLSDTATMPSSTFLKAGSNLADVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARVNLGLTGMATTDPAAVMMKADNLAGLANTATARSNLGLGTASTRNTGDFLSSGANLSDLTNVQAARNNLGLKGAATLDVWGLPANTTAMDFQSSQSDISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWSNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 52988,87710 Da
isoelectric point:7,73388
aromaticity:0,07214
hydropathy:-0,19780

Domains

Domains [InterPro]
G3DSA:2.60.40.3940
406–495
G3DSA:2.60.40.3940
IPR054075
416–495
IPR054075
ALJ97535.1
1 499
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage C11
[NCBI] 		1735586 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALJ97535.1 [NCBI]
Genbank nucleotide accession
KT804923 [NCBI]
CDS location
range 46803 -> 48302
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGAATCAACGCTATCTGGTCTGAAAATGGCCAGAAGGTTGACCCGGGTGCTGTGAAAGTAGGGCTAGGCTGGGTTACGGAACTTCCTCCGTACCAGACTGCAAACTTCATTGAATATAAACAAGACCTGTTTAACGCTCACGTCAACCAACATGGTATCCCTGAATGGGATAGCGTGACAGAGTATCAGGGTAACCTGAGCTACACTCAAGGCGCTAACGGGATCATCTATAAGTGCCTTAGAACCCATTCCGACAAGATTCCAACTGACCCTCTGAACATTACAGCCGGATATTGGCGAGTGGCGTTTGAGGATGCGGGAGAGGCAGCTAAGGTTCAAGCCAACCTTGATCGGCATGTAACAAACTACAACACCCTCTCTGGGATTGGCAACGTAGTTATTGCAAGACAAAACCTAAGTGTGTATAGTAAAGCTGAAGGCGACGCCCGGTACGCTATGAAGCACGGGAACGGCTCTAATGTTTTCAGCGTCGCCACTGCCACACAGCCAACTCACGCGATCCCGCTGAGCCAGCTATCGACTCTCGTTCCTCCTGCGACCGAGACTGTAGCCGGGGTTATGGCAGTTGCTACGACTATCGAGACAGAAGCTGGAGCCAATGATACCAAGGCTGTGAGTCCGCTCAAGGCCGCACAGGTGTATCTGAAGAAGAAAGACAACCTTTCCGGTCTGTCTAACGTCACTGCCGCAAGAGCTAATCTAGGACTGTCGGATACAGCGACTATGCCTTCTTCTACATTCCTGAAGGCAGGTAGCAATCTGGCAGATGTGCCTAACAAGGCGCTGGCAAGATCGAATCTTGGAATTACAAGTAGTGCTACCCAGCCGGAAACCTATTTCTTGAGGAGCGCTCAGAACCTAGCAGATGTACCTAACAAGGCACAAGCTAGAGTCAACCTAGGCCTCACTGGGATGGCTACAACAGACCCTGCGGCGGTTATGATGAAGGCAGACAACCTTGCTGGATTGGCTAACACTGCTACCGCTCGGTCCAACCTAGGGCTAGGCACAGCTTCTACTAGAAATACAGGAGACTTCCTGTCGTCTGGGGCTAACCTGTCCGACCTCACGAACGTCCAAGCAGCTAGAAACAACCTAGGGTTGAAGGGAGCGGCTACGCTCGATGTATGGGGTCTTCCTGCGAATACAACTGCTATGGACTTCCAGTCCAGTCAGTCGGATATTTCCAGAGGATGGGCTCGACTACCAAACGGCCTTCTGCTACAATGGGGAACTGGTCCCGGTCTGTCTGATGACACAAGGACGAATATCCAACTCCCTGTTCCAGCACGAATCTTGAACGTTCAAGTGACCGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGAGCAACACCGGGTTTAGAGTTAGCTGCAACTGGGGCAACTGGTCTTACCCGTTCAACTGGTTTGCTATCACTTCCACCCTGTAA

Tertiary structure

PDB ID
497c1fb0b729543686815d67b6395c7b42b55b40fa2f20b3a6786dea254fd754
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7500
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identifying Host Genes Required for Phage Infection and Genomic Analysis of Pseudomonas aeruginosa Phage C11 Cui,X. and Yang,H. 2016-12-21 — GenBank