Protein

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Genbank accession
AGF91590.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGTTLFARLDTIAYNTEYVLYTGSAPSANTYYRVTSLKVDYTNTQGGSAVGSTWDDTNEDGRYAGQLGFSFSGGSAVTIPGGQVATEDVEGTLLINGQSFITSQDPQYQADDSSSTSTSGDGSDFIGYVSDYDTRYTATVTLKNGGIIKGTKAQAEACYIDVVVEGKYYRISVEAVEPVETYQGVSSIAYYKTAQSPDKGRASMATILKGLETAVNSDLANVTAEIYGSGLYLYGSAAPNVNFLGGAVNEAMNVFGNTAQDVARLPSMCKHGYIVQVANSENVDADNYYVKFLADNGSGGSGKWEETVRPHNFSSGSDPMVKGLDPATMPHALVNNRNGTFTFKKLDETTANADNTDNYWKYREVGDDETNPFPSFKGLEIQKIFFHRNRLGFVANEQVVMSRPGDYFNFFVVSAITTSDDNPIDITVSDIKPAFINHVLPVQKGVMMFSDNGQFILFTESDIFSPKTARLKKISSYECDDALQPVDMGTSVMFSSSVSAYTRTYEATVVDDDVPPKIVEQTRVVPEFLPKTVDTTANTTSLGIVSYGETNTNELYHYKYFDSGERRDQSAWYSWTLQGTLQYMVYTAGTFYVVTKQDNDYILCRHEYVTDATSARTYVVGGVAADVGSPLKTARWFEGCLDNMTIPTAITYTAQGGSVTGPDFTDLTIPYTPTSADNLYAVALSGTDTAGNDVAGTVIKATSVGTNKATFEGVNMTGWTVAVGYRYTTTVELPNYYMSVEAGKYDVDADLRISGINFEMGISGPMEFHLSSIYADMNDYVQYESGMKLDDSDFGKPPSKTSKSVRVPVQKKNEKYNLTIKIPDPFSTALISASWDGIYNQRRHARK
Physico‐chemical
properties
protein length:847 AA
molecular weight: 92508,41450 Da
isoelectric point:4,68719
aromaticity:0,11334
hydropathy:-0,33105

Domains

Domains [InterPro]
IPR058003
158–844
IPR058003
AGF91590.1
1 847
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP6
[NCBI] 		382275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGF91590.1 [NCBI]
Genbank nucleotide accession
HQ634152 [NCBI]
CDS location
range 26303 -> 28846
strand -
CDS
GTGGGGACTACGCTTTTTGCTAGGTTAGATACTATTGCTTATAATACTGAGTATGTATTATATACAGGTTCTGCACCGTCTGCTAATACTTATTATCGAGTAACTTCTTTAAAAGTAGATTATACTAATACCCAAGGTGGTAGTGCTGTGGGTAGTACATGGGATGATACTAATGAAGATGGTAGATATGCTGGACAATTAGGTTTTTCGTTTTCAGGAGGTAGTGCTGTAACTATTCCTGGAGGACAGGTAGCCACAGAAGATGTAGAAGGTACATTACTAATTAATGGTCAATCATTTATTACTTCACAAGATCCTCAATATCAAGCTGATGATTCTAGTTCAACATCTACTTCAGGAGATGGATCTGACTTTATTGGTTATGTTTCCGATTATGATACACGATACACAGCTACAGTTACATTAAAAAACGGTGGTATAATTAAAGGTACTAAAGCACAAGCTGAAGCATGTTATATTGATGTTGTTGTAGAAGGTAAATATTACCGTATTTCAGTAGAAGCTGTAGAACCTGTTGAAACATATCAAGGTGTTTCTAGTATTGCATACTACAAAACAGCACAAAGTCCAGATAAAGGTAGAGCTAGTATGGCTACTATCCTTAAAGGATTGGAAACTGCTGTTAATAGCGATTTAGCTAATGTTACTGCTGAAATATATGGTTCAGGTTTATATTTATATGGTAGTGCAGCTCCTAATGTAAACTTTTTAGGAGGTGCTGTGAATGAAGCTATGAACGTGTTTGGTAACACAGCACAAGATGTAGCTCGTTTACCATCTATGTGTAAACATGGTTATATAGTACAAGTAGCTAATTCAGAAAACGTAGATGCTGATAATTATTATGTAAAATTTCTAGCTGATAACGGTTCAGGTGGTTCAGGTAAATGGGAAGAAACTGTAAGACCACATAACTTCTCATCAGGTAGTGACCCTATGGTTAAAGGATTAGATCCTGCTACTATGCCACACGCTTTAGTTAATAACCGTAACGGTACTTTTACTTTTAAAAAGTTAGACGAAACTACAGCTAATGCTGATAATACAGATAATTATTGGAAGTACAGAGAGGTAGGTGATGATGAGACTAACCCATTTCCTAGTTTTAAAGGCTTAGAAATTCAGAAAATATTTTTTCACAGAAACAGATTAGGTTTTGTTGCAAACGAGCAAGTAGTAATGAGTCGTCCTGGAGATTATTTTAATTTCTTTGTTGTCTCTGCGATTACTACAAGTGATGATAATCCTATTGATATTACAGTATCTGATATTAAACCTGCATTTATTAATCATGTCTTGCCTGTTCAAAAAGGTGTGATGATGTTTAGTGATAACGGTCAGTTTATATTATTTACTGAATCTGATATATTTAGTCCTAAAACAGCAAGGCTGAAAAAGATATCTAGCTATGAATGTGATGATGCTTTACAACCTGTAGACATGGGAACTTCAGTTATGTTTAGCTCGTCTGTATCTGCATACACTAGAACGTATGAAGCTACTGTTGTAGACGATGATGTACCTCCAAAAATAGTAGAGCAAACACGAGTAGTTCCTGAATTTTTACCAAAAACTGTTGATACTACAGCTAACACAACCTCTTTAGGTATAGTTAGTTATGGTGAAACAAATACAAACGAGTTGTATCATTATAAATATTTTGATTCAGGAGAACGTAGAGATCAATCTGCATGGTATTCATGGACATTACAAGGTACATTACAGTATATGGTATATACTGCTGGTACTTTCTATGTTGTCACTAAACAAGATAATGATTATATATTATGTAGACATGAATATGTCACAGATGCTACATCTGCTCGAACATATGTTGTTGGTGGAGTAGCTGCTGATGTAGGTTCTCCGTTAAAAACAGCTAGATGGTTTGAAGGTTGTCTAGATAACATGACTATACCAACTGCTATAACTTATACAGCTCAAGGAGGTTCAGTAACAGGACCAGATTTCACTGATTTAACTATACCTTATACTCCAACTTCAGCTGATAATTTATATGCTGTAGCTCTTTCTGGAACAGATACAGCTGGAAATGATGTTGCTGGTACGGTAATTAAAGCTACTTCTGTAGGTACTAATAAAGCCACGTTTGAAGGAGTCAATATGACTGGATGGACAGTAGCTGTAGGTTATAGATATACAACAACAGTAGAGCTACCTAATTACTATATGTCCGTAGAAGCTGGTAAATATGATGTAGATGCTGACTTAAGAATTTCTGGAATAAATTTTGAAATGGGTATTTCTGGTCCTATGGAGTTTCATTTATCTTCTATCTATGCAGATATGAATGATTACGTTCAATATGAATCTGGTATGAAACTAGATGACAGTGACTTTGGTAAACCACCTTCTAAAACATCTAAGTCAGTGAGAGTACCAGTACAGAAAAAGAATGAAAAATATAATCTTACTATAAAAATACCTGATCCTTTTTCCACCGCTTTAATCTCAGCAAGCTGGGATGGCATTTATAACCAACGAAGACATGCACGAAAGTAA

Tertiary structure

PDB ID
e15b07260d69f51bf8a7b3c2bec6ba6de92540487fe3029a532907c550c398f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6429
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP6 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank