Protein

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Genbank accession
ADE87504.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MPFDQNQLPTWNKEGVEPPQSLKDNGWQPNQKPPADYFNWFFNKVYKALQSLFANAQHKDEKGQPNGYAGLDGNAKVPTSQLPVATPTTLGAMSASDKTKLDGIEPGAQRNTVTSVNNKTGAVTLTASDVGASPAGHTHTFAEITSKPTTLAGYGITDAIPASQKGAANGVASLDGSTKVPTTQLPSASTTQAGIVQLNDTLTSTSTTQAATANAVKQVNDAVVAHLADNVKHITAAERTTWNSAEANAKAYTDTAPEPMQRNFGIFNVYKSGKDSNGIFTTVDYKRADGTLYARSALSGGTSPKYTTRTVTYYGTDGTTVVRTDTYTLTYDADGDLISEVKN
Physico‐chemical
properties
protein length:343 AA
molecular weight: 36299,49360 Da
isoelectric point:6,21406
aromaticity:0,07580
hydropathy:-0,54606

Domains

Domains [InterPro]
IPR005068
189–229
IPR005068
ADE87504.1
1 343
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Deep-sea thermophilic phage D6E
[NCBI] 		749413 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Geobacillus sp. E263
[NCBI] 		391290 Bacteria > Firmicutes > Bacilli > Bacillales > Bacillaceae > Geobacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADE87504.1 [NCBI]
Genbank nucleotide accession
GU568037.1 [NCBI]
CDS location
range 17630 -> 18661
strand +
CDS
ATGCCTTTTGACCAAAATCAATTGCCAACATGGAACAAAGAAGGGGTAGAACCGCCGCAAAGTTTAAAGGATAATGGTTGGCAACCAAATCAAAAACCTCCCGCTGACTATTTCAACTGGTTCTTTAACAAGGTGTATAAAGCATTGCAATCTCTTTTTGCAAACGCACAACACAAGGACGAAAAAGGACAGCCAAACGGGTATGCCGGTTTGGATGGAAATGCAAAAGTACCAACAAGCCAACTACCGGTTGCTACTCCTACAACACTAGGAGCCATGTCCGCGTCCGACAAAACCAAACTCGACGGCATCGAGCCAGGGGCGCAACGAAACACGGTGACAAGCGTCAACAACAAGACCGGCGCTGTCACCCTAACTGCTTCCGATGTCGGAGCTAGCCCGGCGGGGCATACACATACATTTGCGGAAATCACAAGTAAACCCACTACCCTAGCAGGCTATGGCATTACCGATGCGATCCCAGCCAGCCAAAAAGGCGCAGCAAACGGCGTCGCATCTCTCGACGGAAGTACAAAAGTGCCGACAACCCAATTGCCGTCTGCAAGCACAACACAAGCCGGCATCGTCCAACTCAACGACACACTGACAAGCACATCGACGACACAAGCCGCAACAGCAAATGCGGTGAAACAAGTGAATGATGCAGTTGTTGCGCATTTGGCTGATAATGTGAAGCACATAACAGCCGCAGAAAGAACAACGTGGAACAGCGCAGAAGCAAACGCAAAAGCGTACACTGATACCGCACCTGAACCTATGCAACGTAACTTCGGTATTTTCAATGTATACAAAAGCGGAAAAGACAGCAACGGAATTTTTACAACGGTAGATTATAAAAGAGCCGATGGAACTCTATACGCAAGGTCGGCGTTAAGTGGTGGAACAAGCCCAAAATACACAACGAGAACAGTTACTTATTACGGAACAGATGGAACAACCGTTGTTCGTACAGACACATATACACTTACTTATGATGCAGACGGTGATTTAATTAGCGAGGTGAAAAACTAA

Tertiary structure

PDB ID
6d7e44b4024f61ebb3b194607a05e39b41bdc88b03fe557e30ed0b9dffa3fa8f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8193
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Analysis of Deep-Sea Thermophilic Phage D6E Wang,Y. and Zhang,X. 2010 20889772 GenBank