Protein

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Genbank accession
CAH1088814.1 [GenBank]
Protein name
Phage-related holin (Lysis protein)
RBP type
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVVSRPDYSVGVWASNGDIAAPTSEKIEIGHIVEKPLKEVMNWIQNRQDRGIVYLMQQGISDWVSTETYPSNAYVKRSGVIYKAYAQNEDRDPLSNPDIWKLAFDTYGSAAAVQLEVDKIKSEEGYLDLYVSKNNPILNSRAEGVSYVAAEGVPTLTSDEYGYTFKNHLLSGLFIAGDDPIILKDGVEVARFSPPSSSNENSKKVVTMDVLLDFIQTYKVGDIYITTQNENPATRLGYGVWERYAEGKALVGFSSSTSNQIPEWVKTGGGEYGEYSTILEANHLPKKTNYTYQRFTNQTSGDIVVGGIDPNGNAKYNNIEPIVGTVGDQPHNNVQPSITVYVWRRIS
Physico‐chemical
properties
protein length:348 AA
molecular weight: 38581,49950 Da
isoelectric point:4,96445
aromaticity:0,10345
hydropathy:-0,42845

Domains

Domains [InterPro]
IPR053827
217–347
IPR053827
CAH1088814.1
1 348
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage MD-2021a
[NCBI] 		2899278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH1088814.1 [NCBI]
Genbank nucleotide accession
CAKLQH020000015 [NCBI]
CDS location
range 35887 -> 36933
strand +
CDS
ATGTCTGTAGTTAGCAGACCAGATTATTCAGTTGGTGTATGGGCATCAAATGGTGATATTGCAGCACCAACATCTGAAAAAATTGAGATTGGGCACATTGTAGAAAAACCTCTCAAAGAGGTTATGAATTGGATTCAGAATAGACAAGATCGTGGAATTGTCTATTTAATGCAACAAGGCATTTCTGATTGGGTTTCGACAGAAACTTATCCTTCAAACGCTTATGTTAAAAGAAGTGGTGTTATCTATAAAGCTTATGCACAAAATGAAGATCGCGACCCTTTATCAAATCCTGATATTTGGAAATTAGCATTTGATACATACGGTAGTGCAGCAGCAGTTCAGCTTGAAGTAGATAAGATTAAGAGTGAAGAAGGGTATCTTGATTTATATGTAAGCAAAAACAATCCTATTTTGAATTCGAGAGCAGAAGGTGTTTCTTATGTTGCAGCAGAAGGTGTTCCAACGCTTACAAGTGACGAGTATGGATATACTTTTAAAAATCATCTATTAAGTGGTTTATTTATTGCAGGTGATGACCCTATCATCTTAAAAGACGGTGTTGAAGTAGCTAGATTTTCACCACCGTCAAGTTCAAATGAGAATTCTAAAAAAGTAGTGACAATGGATGTCTTATTAGATTTCATTCAAACATATAAAGTTGGTGATATTTATATTACCACTCAGAATGAAAATCCAGCTACCAGACTTGGTTATGGAGTTTGGGAGAGATATGCCGAAGGAAAAGCTTTAGTTGGTTTTAGTTCATCAACTTCAAATCAAATCCCTGAGTGGGTTAAAACTGGAGGTGGTGAATATGGTGAGTATTCAACTATATTGGAAGCAAATCATTTACCTAAAAAAACAAACTACACTTATCAAAGATTCACCAACCAAACTTCGGGTGACATTGTAGTTGGCGGTATAGACCCAAATGGTAATGCGAAATACAACAACATTGAACCTATCGTTGGAACAGTCGGTGATCAACCTCACAACAATGTTCAACCATCAATTACCGTTTATGTTTGGCGAAGAATTAGTTAA

Tertiary structure

PDB ID
6eaea9d4a07e56e0dbac86094f14c295d31d7173c5e3c9efe29b18f20e06062e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50