Protein

View in Explore
Genbank accession
AAR97679.1 [GenBank]
Protein name
Bbp13
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA
Physico‐chemical
properties
protein length:681 AA
molecular weight: 73664,86410 Da
isoelectric point:5,52972
aromaticity:0,08957
hydropathy:-0,12834

Domains

Domains [InterPro]
IPR013783
194–257
IPR013783
AAR97679.1
1 681
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BPP-1
[NCBI] 		2885909 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAR97679.1 [NCBI]
Genbank nucleotide accession
AY029185 [NCBI]
CDS location
range 15217 -> 17262
strand -
CDS
ATGTCCAACGTCCGCGTCCTGCAACGCTCCTTCGGCGGCGGCGAAATCAGCCCGGAAATGTTCGGGCGCATCGACGACGTGAAGTACCAAAGCGGCCTCGCCATCTGCCGCAACTTCGTGGTCAAGCCCCAAGGCCCGGCCGAGAACCGCGCCGGCTTCGCCTTCGTGCGCGAGGTGAAGGATTCGGCCAAGAAGGTGCGGCTCATCCCGTTCACCTACTCGGTCACGCAAACAATGGTGATCGAGTTGGGTGCGGGTTATTTTCGCTTCCATACCAACGGCGGCACGCTGCTGGACGGCGCCGTGCCCTACGAAATCGCCAATCCCTACGCCGAAGCCGACCTGTTCAACATCCACTATGTCCAGTCGGCTGACGTGCTCACGCTCGTGCATCCGAACTATGCGCCGCGTGAACTGCGCCGCCTGGGCGCGACCAACTGGCAACTGGCGACCATCGCCTTCACGTCGCCGGTGGCTACGCCCACGAGCGTGACCGCCACGTCGAACAACAAGGGCACCGACTACACCTACCGCTACGTGGTCACGGCCCTGGATGCCGAGGGTAAAACCGAGTCCGCTCCCTCGTCGGCCGGCACCTGCACCAACAACCTCTTCACCAACGGCGGCGCCAACACCATCGCGTGGTCGGCCTCGTCCGGCGCGTCGCGCTACAACGTCTATAAGGAGCAAGGCGGCCTGTACGGCTATATCGGCCAGACCACCGGCACCTCGCTGGTGGACGACAATATCGCGCCCGACCTGTCCGTCACGCCCCCGATCTACGACGCCGTGTTCAACGCCGCCGGCGATTACCCCGCGGCCGTGTCCTACTTCGAGCAACGCCGATGCTTTGCCGGCACTACCAACAAGCCGCAGAACATTTGGATGACGCGCAGTGGCACCGAATCGGCCATGTCGTACTCGCTTCCCGTGCGCGACGACGACCGGGTAGCCTTCCGGGTGGCCGCGCGCGAGGCCAACGCCATCCGCCATATCGTGCCGCTCACCGAGTTGCTGCTGCTCACGTCTTCGGGCGAATGGCGCGTGGCGTCGGTGAACTCCGACGCGGTAACGCCCACCACCATCAGCGTGCGGCCGCAGTCCTACGTCGGGGCCACCGACGTGCAGCCGGTCGTGGTCAACAACACGACCATCTACGGCGCCGCGCGCGGCGGCCACGTGCGCGAACTGGCCTACAACTGGCAGGCCAACGGTTTCGTCACCGGCGACCTGTCCCTGCGCGCGGCGCACCTGTTCGACAATCTCGACATTCTGGACATGGCCTACGCGAAGGCGCCGCAGCCTATCGTGTGGTTCATCAGCAGCAGCGGCAAGCTGCTGGGCCTCACCTACGTGCCCGAGCAACAGATCGGCGCGTGGCACCAGCACGACACGGACGGCGTGTTCGAGTCCTGCGCGGTGGTGGCCGAGGGTAACGAGGACCGGCTCTATGCCGTCGTGCGTCGCACCATTGGCGGCAACGAGGTGCGGTATGTCGAGCGCATGGCCTCGCGCCAGTTCGATGCCCAGGCGGACGCCTTCTTCGTCGATAGCGGCCTGACGTACTCGGGCGAGCCGGTAAGCCATATCAGCGGCCTGGAGCACCTCGAAGGGAAAACCGTCAGCATCCTGGCCGATGGCGCGGTGCATCCGCAGCGCGTCGTCACTGACGGCGCCATTGACCTGGACGTGGAGGCCGGCACCGTGCATATCGGCCTGCCCATCACCGCAGAACTGCAAACCCTGCCGGTGGCGATGCAACTGGACGGCAGCTTCGGCCAAGGGCGCGTCAAGAACATCAACAAGCTGTGGTTGCGCGTGCATCGGTCGTCCGGCATCTTCGCCGGCCCGCACGCGGACGCGCTCACCGAGGTGAAGCAGCGCACGTCCGAACCCTACGGCTCACCGCCTGCACTCAAGAGCGAGGAAATTCCGCTCGTCCTGTCGCCGAAATGGGGCGACAGCGGGCAACTGTTTGTGCGGCAGGCCGACCCTCTGCCGTTGATGATCGTGTCGATGTCGGCGGAAATCGCCATCGGCGCATAG

Tertiary structure

PDB ID
9ce450cdb0280486976658dd040d5492439b0ac109297085d40937bd9471a63d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9446
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Generalized transduction in Bordetella bronchiseptica and Bordetella pertussis Liu,M., Martinez de Tejada,G., Bruhn,K.W., Cotter,P.A. and Miller,J.F. 1967-05 — GenBank