Protein

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Genbank accession
XLG29375.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSFDSPLPPPTFGVATIPAVTRPEGFCEKQINWRNDPQEKLTVRPKFRHLENTLPDWTQGTPDTITRHTAFTNGMRQEVIVGVTRATKIVEVMRRTEHGVFTSVHRGVNDDWLADELDIGINDIDDKFYIWNRAATMGVSTAPAIDASKWKQASSINVTSALNYSEGVTVTAYLDGVELIEATHTVPGVTSGDTSTADTQRATNYVAEQLATQLDAHIDLRARFKGSNVHVKWLGLDDTKELTLAVSSGRGEGSVVVHNYAVTSITALPKYSEEDRIIKVAPDPGSDKGVYYLNATPSATFDNELSEVVWTECPSPVDGTISFTSYVLTLDEDNNLRQVNFKPRRVGDDESNPPLDFVGKKINQIESFQDRLVLLAGSKMNISKTRDHEQFWLNSALELLVNDPTDVGTSGNNSTLRHTVFHNRDLLIFAEDAQFKIDGTTAITPQTAAMPITTANECNLDVAPVLLGSSVYYANNYGGSGGIRRFEVQADTVVDSSVSITDHIVGYIKGKITELVSNANQNMLICRSSECAPNEFFVFEQQFYGDEPIYSWCSWRLREGVVINGLDLFNEVLTVWYNDKHYMYCDLKSGEVYPLRDVCLDQFGSKTLQGNELRLPEEYPYNDEDAFRILLADQSHRAVLAILEYDYSKDEGTGEHVFTLKYNWFNDKEVYYGYQYQAIYEPTRPFERDRQGNVRTTDRLRIAHYFLELSNTYRLTRRINAEYWDLPDEEFTSLNATTNTYIDEIKPYTGQWRAQIGMNADDCTVQFINDSPYSATIASISHRSQLYSTKTRR
Physico‐chemical
properties
protein length:793 AA
molecular weight: 89502,55950 Da
isoelectric point:4,90625
aromaticity:0,10214
hydropathy:-0,44262

Domains

Domains [InterPro]
IPR058003
13–791
IPR058003
XLG29375.1
1 793
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PhPV1.2
[NCBI] 		3377109 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLG29375.1 [NCBI]
Genbank nucleotide accession
PQ511476 [NCBI]
CDS location
range 5867 -> 8248
strand -
CDS
ATGAGCTTTGATTCACCGTTGCCACCACCTACGTTTGGTGTAGCAACAATACCTGCGGTAACACGACCAGAAGGATTCTGTGAGAAGCAGATAAATTGGCGTAATGACCCGCAAGAGAAGTTAACGGTAAGACCTAAGTTTAGACACTTAGAGAATACTCTACCAGACTGGACACAAGGTACACCAGACACGATTACTAGACACACAGCGTTTACTAATGGTATGCGTCAAGAAGTAATAGTAGGTGTTACCAGAGCAACGAAGATAGTCGAAGTCATGCGTAGAACAGAGCACGGTGTGTTCACGTCAGTGCACCGTGGCGTTAATGACGACTGGTTAGCAGATGAGCTAGATATAGGTATCAATGATATTGATGACAAGTTCTATATCTGGAATAGGGCAGCCACGATGGGTGTGTCAACAGCACCAGCCATTGATGCTTCCAAGTGGAAGCAAGCATCGTCTATCAACGTAACATCAGCATTGAACTACTCTGAAGGTGTGACTGTAACAGCATACCTAGACGGCGTAGAGTTGATAGAAGCTACGCACACAGTTCCAGGTGTGACATCTGGAGATACATCTACAGCAGACACGCAACGAGCTACAAACTATGTAGCAGAGCAGCTAGCTACACAGCTAGATGCTCATATAGACTTACGCGCAAGGTTCAAAGGTTCTAACGTACACGTGAAGTGGTTGGGTCTGGATGATACTAAAGAGCTGACACTAGCTGTTAGTTCAGGTCGCGGTGAAGGCTCGGTGGTAGTACATAACTACGCAGTAACAAGTATCACAGCACTACCTAAGTATTCAGAGGAAGACCGGATAATCAAGGTAGCACCAGACCCAGGTAGTGACAAAGGTGTGTACTACCTAAACGCTACACCATCAGCTACGTTTGATAATGAGCTATCAGAAGTGGTCTGGACTGAGTGTCCATCCCCAGTGGATGGGACTATTAGCTTCACGAGTTACGTACTGACACTGGATGAGGATAACAACCTCAGACAAGTAAACTTCAAACCTAGACGAGTAGGCGATGACGAGAGTAATCCTCCGTTAGACTTCGTCGGTAAGAAGATAAACCAGATAGAGTCATTCCAGGATAGGCTCGTACTGCTAGCAGGCAGTAAGATGAACATCAGTAAGACTCGTGACCATGAGCAATTCTGGTTGAACAGCGCACTAGAGTTATTGGTGAATGACCCGACTGATGTGGGTACATCTGGTAACAACAGTACGCTAAGGCACACAGTGTTCCACAACCGTGACTTGTTAATCTTCGCAGAGGATGCTCAGTTCAAGATAGACGGTACAACAGCTATCACACCGCAGACAGCAGCAATGCCTATTACCACAGCGAACGAATGTAATCTTGATGTAGCACCAGTGCTACTAGGAAGCAGCGTATACTATGCCAACAACTACGGCGGCAGCGGTGGTATTCGCAGGTTCGAGGTGCAGGCAGACACTGTAGTAGACTCATCAGTATCTATCACCGACCACATAGTCGGATACATCAAAGGTAAGATAACTGAACTGGTAAGCAATGCCAACCAAAATATGCTGATATGTAGAAGCTCTGAGTGCGCTCCTAACGAGTTTTTCGTTTTCGAGCAACAATTCTACGGTGACGAACCAATCTACTCGTGGTGCTCTTGGAGATTGCGAGAAGGCGTGGTTATCAACGGTTTGGATTTGTTTAATGAAGTTCTAACTGTATGGTATAACGACAAGCACTATATGTACTGCGACCTCAAGTCAGGGGAGGTATACCCACTAAGGGACGTATGCTTAGACCAGTTCGGTAGTAAGACACTACAAGGCAACGAGTTACGACTGCCAGAGGAGTATCCTTATAACGACGAGGATGCCTTCCGCATCCTCTTAGCTGACCAGAGTCATAGAGCAGTGTTGGCTATACTAGAGTACGACTATAGTAAAGACGAAGGCACAGGTGAGCATGTATTCACCTTAAAGTACAACTGGTTCAATGATAAGGAGGTGTACTACGGTTACCAGTACCAAGCGATATACGAACCTACACGCCCATTCGAGCGTGACAGGCAAGGTAACGTGAGGACTACCGATAGACTACGTATAGCGCATTACTTCCTAGAGCTGAGTAACACGTATCGCTTGACGCGACGTATTAACGCTGAGTACTGGGACTTGCCAGACGAAGAGTTTACATCGTTGAATGCTACGACTAATACGTACATAGACGAGATTAAGCCTTATACTGGACAATGGCGTGCTCAGATAGGTATGAATGCTGATGACTGCACCGTGCAGTTCATCAATGACTCACCGTACTCTGCTACTATAGCGAGTATCTCGCATCGTAGTCAGTTGTACTCCACCAAGACTAGGAGATAA

Tertiary structure

PDB ID
4566ce040b025dfd57bb52633cb28c61516b8b2f4de586b803fdef21a4a0e33c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2434
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of a novel lytic Autographiviridae bacteriophage PhPV1.2 specific to Vibrio parahaemolyticus Keerthi Babu,R., Sobhana,K.S., Aleena,A., Neethu,K.P., Jayasree,V.S., Grinson,G. and Gopalakrishnan,A. 2016 — GenBank