Protein

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Genbank accession
CEK40570.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MVKYNVHKALAEKKLLEDKIDRCISNFKIVGTKKGSDKNVYETKTSVEDFNVEVSSRYQQIEDLIYNYNALDKAINISNAITNVQIGNKNYTVLEAIKRKNSIELDKSLLRQMVSNYDCMMSEVNRRNEEVQKNTDRMFEEKEKSKDGAELISFYKKQQEWSLVDPLKVREKIEKLRDEIEEFEKEVDFALSTSNALTIIDVDLK
Physico‐chemical
properties
protein length:205 AA
molecular weight: 23949,94280 Da
isoelectric point:5,52273
aromaticity:0,07317
hydropathy:-0,71561

Domains

Domains [InterPro]
Coil
121–141
Coil Coil
CEK40570.1
1 205
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD211
[NCBI] 		1582152 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40570.1 [NCBI]
Genbank nucleotide accession
LN681537 [NCBI]
CDS location
range 6279 -> 6896
strand +
CDS
ATGGTTAAATATAATGTTCATAAAGCTTTAGCAGAAAAGAAGTTATTAGAAGATAAGATAGATAGATGCATTAGTAATTTTAAAATTGTAGGTACTAAAAAAGGCTCTGATAAAAATGTATATGAAACAAAAACAAGTGTAGAAGATTTTAATGTAGAAGTTTCAAGTAGATACCAACAAATAGAAGATTTAATATATAATTATAACGCATTAGATAAAGCAATTAATATCTCTAATGCTATAACAAATGTTCAAATTGGTAATAAAAATTATACAGTTTTAGAAGCAATAAAAAGAAAAAATAGTATAGAATTAGATAAATCCTTGTTGAGACAAATGGTTAGTAACTATGATTGTATGATGTCTGAAGTAAATCGTAGAAATGAAGAAGTGCAAAAAAATACAGACAGAATGTTTGAGGAAAAAGAAAAAAGTAAAGATGGAGCAGAACTTATTTCATTTTATAAAAAACAACAAGAATGGTCTTTAGTAGACCCTTTAAAAGTAAGAGAGAAAATAGAAAAATTAAGGGATGAAATAGAAGAATTTGAAAAAGAAGTTGATTTTGCATTGAGTACATCAAATGCACTTACAATTATAGATGTAGATTTAAAATAG

Tertiary structure

PDB ID
8cf5c29026045bbc44f5176ebc9fe3de2b5c83ad49cd16800790676a4745df2d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9345
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
High prevalence and genetic diversity of large phiCD211-like prophages in Clostridium difficile Garneau,J.R., Sekulovic,O., Dupuy,B., Soutourina,O., Monot,M. and Fortier,L.C. 2018-02 — GenBank