Protein

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Genbank accession
QCS37442.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNTQLSEKLGANNSIFDVKEQPSIRLSAFNFSRKHNTTLDIGGIYPVDFFSVYPNDKVDLKLRYMLDTLPLAVPPMTNYKVRTHWYFVKKSALWAGWNTFITGGRTGLDLKIPSLLNSFWGRTYSDISDFADAGIGEVTTSSLSGLPAYLGIPPRFGLNVSDGGHYLPFVRVSSTPENPTGVSARLNALPFMAYLKIFRHAYLPANLIQDNKFWFPDNLDDHWRINYDASNLLHLGLFSGNGSPTEPSYSIVPKSTDNCADLTCLRYAPFDMDYFTSSKPWLVRGGTETSLSSDIDISGLQIESAPGVSFVSLRAGPFMSAPSGVSKYLIQDGSGVCMTGPSAGTVSGSQTELGVYSDSISGALTLSGTASTSLSLTANTLRNLIAVSVWQERNALTNGNYNLLVQSHWGIKPREPDYEPLYIGGTSDYVQFSNVIQTSQTAGRQVLGQSASIGGATSGADVFSYKANDYGYIFGVMIISPEVSYSQGTSREFSDLNLEDQFTPEFASLGYQPILKQELFTSTNGTVNDSLFGYQTRFAYLKQRLNRISGLLAVSPDQDIMFSAYNQTRWFNNSPSLSLEFCTMAPYNIRRDFMAFPEYPLFRAQIASDVKLIRALPYQSSPNTFGF
Physico‐chemical
properties
protein length:627 AA
molecular weight: 69098,83200 Da
isoelectric point:5,60696
aromaticity:0,12440
hydropathy:-0,16810

Domains

Domains [InterPro]
IPR037002
19–300
IPR037002 IPR037002
IPR016184
21–114
IPR016184 IPR016184
IPR003514
24–130
IPR003514 IPR003514
QCS37442.1
1 627
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Tortoise microvirus 103
[NCBI] 		2583103 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCS37442.1 [NCBI]
Genbank nucleotide accession
MK765659 [NCBI]
CDS location
range 1 -> 1884
strand +
CDS
ATGAATACACAACTTTCCGAGAAACTTGGTGCTAATAACTCGATTTTTGATGTAAAAGAACAACCTAGTATAAGGCTTTCTGCTTTTAATTTTTCAAGGAAGCATAATACTACGCTTGATATTGGTGGCATTTATCCTGTTGATTTCTTTTCAGTTTATCCTAATGATAAGGTTGATCTTAAACTTCGGTATATGCTTGATACACTTCCTTTAGCTGTTCCTCCTATGACTAATTATAAGGTACGTACACATTGGTATTTTGTGAAAAAATCTGCGCTTTGGGCTGGTTGGAATACTTTTATTACTGGTGGCCGTACTGGTTTGGATTTAAAAATCCCGTCTTTATTGAATAGTTTCTGGGGACGAACTTATTCTGATATTTCTGATTTTGCTGATGCAGGTATTGGTGAGGTGACGACTAGTTCGTTGAGTGGTTTGCCGGCTTATCTTGGTATACCTCCGCGTTTCGGTTTGAATGTTTCTGATGGAGGACATTACTTGCCTTTTGTCCGTGTATCATCTACACCTGAAAACCCCACTGGAGTTTCTGCGAGGTTAAATGCTTTGCCGTTTATGGCTTATTTGAAAATTTTTAGGCATGCTTATCTTCCAGCGAATTTAATTCAGGATAATAAGTTCTGGTTCCCTGATAACCTCGATGATCATTGGCGTATTAATTATGATGCTTCCAATCTTCTTCATTTAGGACTTTTTTCAGGAAATGGCTCTCCTACAGAGCCTAGCTATTCAATTGTACCTAAAAGCACTGATAACTGTGCTGATTTGACTTGTCTACGTTATGCACCCTTTGATATGGACTATTTTACGAGTTCTAAACCTTGGTTGGTTCGTGGTGGCACTGAGACTTCTCTTAGTAGTGACATTGATATTTCTGGCCTACAGATTGAGAGTGCTCCTGGCGTGAGTTTTGTTTCGCTTAGAGCGGGCCCTTTTATGTCAGCGCCCTCTGGTGTGTCTAAGTATTTGATTCAAGATGGTAGTGGCGTGTGTATGACTGGGCCAAGTGCAGGTACTGTATCTGGTTCTCAGACTGAACTTGGTGTATATTCGGATTCTATTTCTGGTGCCTTGACTCTTTCCGGTACAGCATCTACTAGCCTATCACTTACGGCTAATACTTTGCGAAACCTGATAGCTGTTTCTGTTTGGCAAGAACGTAACGCGTTGACTAATGGTAATTATAATCTTTTGGTACAGTCCCATTGGGGAATAAAACCTCGTGAGCCTGATTATGAACCGCTTTATATTGGCGGAACCTCTGATTATGTCCAATTTTCTAATGTTATACAGACTTCTCAGACTGCTGGACGTCAAGTTTTAGGTCAGTCAGCTTCCATTGGTGGTGCAACTTCTGGTGCAGACGTTTTTAGTTATAAGGCGAATGATTATGGTTATATCTTTGGAGTGATGATAATTTCTCCGGAAGTTTCATATTCTCAAGGTACTTCACGAGAGTTTTCTGATTTGAATCTTGAAGATCAGTTTACCCCCGAGTTTGCTTCTTTAGGATATCAACCTATTTTGAAGCAAGAGCTTTTTACAAGTACTAATGGTACTGTTAATGATTCTCTTTTTGGGTATCAGACTAGATTTGCTTATTTGAAGCAACGTTTGAATAGAATTTCTGGTCTTTTAGCAGTCTCTCCTGATCAAGATATAATGTTTTCAGCATATAATCAGACTCGCTGGTTTAATAATTCGCCGTCTCTTTCTCTTGAATTTTGTACTATGGCTCCTTATAACATACGTAGAGATTTTATGGCTTTCCCCGAGTATCCTCTCTTCCGAGCTCAGATTGCTAGTGATGTTAAGCTTATTCGTGCATTGCCGTATCAATCATCGCCCAATACTTTTGGTTTCTAG

Tertiary structure

PDB ID
0702f3b30b69f6f42668489360835c4950380cb0c33578338dac0251a98c31e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5098
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Microviruses associated with Mojave and Sonoran Desert tortoises Orton,J., Morales,M., Dolby,G.A., Schmidlin,K., Fontenele,R.S., Kraberger,S., Webster,T., Wilson,M., Kusumi,K. and Varsani,A. 2022-01-02 — GenBank