Protein

View in Explore
Genbank accession
QVJ07756.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MNTAITPKIADCVAETTDTVGVGDINLTGPIVGFTSFSTIGGDCEVYYTIQEGFDKEIGLGNYISSTNTIKRTNVIATIVGSKHSTGGTPLNLKGSAEVFCTIGHNLIEEICEHINGNTVEIIVLKSLVEQITGDLSGYVTKTELSETQHNSFPGRDAAGAHPASAINASSGKSVEQELLDRVTHGELTKAQSDVLDGKLFKGSNGKSVQVGDEIPTGTTHLTISVGGGEILVRAWESLSLPATVTGIPTGANEFLEYVVDTDQGAFKFVTKDIWKLRGNGKKGEVFVEGFGADMTGATYCTDQVRKAAEYCASTGLPLHGGYSGTLRIEPTANPIQLQTETDFSGVTIKPNCGDKTGLRIFETIEESGFQDVTSLIDLTRLTKGETRLYSSTANQPLDLEGFFAIETDVVGLYRWNNSTWTPEYLKQPLSVRGKWGSLSRPLQFDFATHNTGLTIKYKPVRKPLKIKFGKLDLEGSKLFSLHIAKRCNTNTHAPLLVNLENTASDALYTLIQNLFMDEWKVDDAQGGQLGSETIGAYFALMSDCTNTVFSGCKNGYGWGGIDGNNSWGITAINDCEFFATSLHYNCADFIMIGGKVHRGSGIHGYGHFITDKVTYLMKARKDSDLNDNIVYTRTDYGSSWDGTISLISPQITLKPTMSKINYVYIQGAKTDPSKRGVIENYVPDVLIDNPIMRVIGSSVNNIDVNAIFLECSDANSAWYDYTYAPEYFRITNSYASSNNYVRYSSLTNEFDHTSGKYLKKKSDYFYCDVINAQAKLNPSFAASWSQAGFVANVQTLVFPKALGIKQTYNVTNCDMHGFMLRCTENITVNISGGAIVQPFRSPVGAQGNIQNYDPDSSFNVSDCRAIKVWDVTGSSVFDTLVIGVNWDNVIFDWASYFTQAEPSTSDPLFSTQFIAQTVSMRGCKIQQPRYPAKETVTTQVKDLVTNGYGDTTHYLASQQ
Physico‐chemical
properties
protein length:960 AA
molecular weight: 104906,45610 Da
isoelectric point:5,31765
aromaticity:0,09896
hydropathy:-0,22906

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_VA-RY-3
[NCBI] 		2831177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ07756.1 [NCBI]
Genbank nucleotide accession
MW900438 [NCBI]
CDS location
range 35329 -> 38211
strand -
CDS
ATGAATACTGCCATTACCCCTAAAATCGCAGACTGCGTAGCCGAGACAACTGACACTGTAGGTGTAGGTGATATCAACCTTACTGGTCCAATCGTAGGCTTTACTTCTTTCAGCACAATAGGTGGTGACTGTGAAGTCTACTACACCATACAGGAAGGCTTTGATAAAGAGATTGGCCTTGGCAATTATATAAGCTCCACCAATACGATCAAAAGAACAAACGTAATCGCTACAATTGTAGGCAGCAAGCACTCAACAGGCGGAACTCCTTTGAACTTGAAAGGCAGTGCTGAAGTTTTCTGTACTATAGGTCACAATTTGATTGAGGAGATATGCGAGCATATAAACGGCAATACTGTTGAAATAATCGTCTTGAAGTCGCTAGTCGAGCAAATAACCGGCGACCTTTCAGGTTACGTGACTAAAACCGAGCTATCAGAAACACAGCACAATTCATTCCCTGGCAGGGACGCCGCAGGGGCTCACCCAGCTTCCGCGATTAACGCTTCATCGGGCAAGAGTGTGGAGCAGGAATTACTAGACAGAGTCACCCATGGTGAATTAACTAAAGCTCAGAGTGACGTTTTAGACGGCAAGTTGTTTAAGGGTTCGAATGGTAAATCCGTGCAGGTTGGTGATGAAATTCCAACTGGGACAACGCATTTAACAATCTCCGTTGGAGGGGGTGAAATTCTAGTTAGAGCTTGGGAGTCCTTAAGCTTACCAGCAACGGTAACAGGGATTCCAACAGGTGCCAATGAATTTCTTGAGTATGTAGTGGATACAGACCAAGGGGCGTTTAAATTTGTAACTAAAGACATTTGGAAGTTAAGGGGTAATGGAAAGAAAGGCGAGGTATTTGTAGAGGGGTTTGGTGCCGACATGACAGGTGCAACATACTGCACTGACCAAGTGAGAAAGGCGGCTGAATACTGTGCATCAACCGGGCTACCATTACATGGTGGCTATTCTGGTACGTTAAGAATTGAACCAACAGCAAACCCTATACAGCTTCAAACGGAAACTGACTTTTCTGGCGTGACGATTAAGCCAAATTGTGGTGATAAAACAGGACTGCGTATTTTCGAGACAATCGAAGAATCAGGGTTCCAAGATGTAACATCACTAATTGATTTAACGAGACTAACTAAGGGTGAAACCAGACTTTACTCATCTACAGCAAACCAACCTTTGGACTTAGAGGGTTTCTTTGCAATTGAGACGGACGTAGTGGGTCTGTACCGATGGAACAATTCAACATGGACTCCAGAGTATTTAAAGCAACCTTTATCGGTACGTGGTAAGTGGGGTTCATTATCTAGACCATTGCAGTTTGACTTTGCCACTCACAATACCGGCTTGACCATAAAATACAAACCAGTTAGAAAGCCATTGAAAATTAAGTTTGGTAAGCTTGACCTAGAAGGTTCGAAGTTGTTCTCACTGCATATCGCTAAACGGTGTAACACGAACACACACGCGCCATTACTTGTAAACCTAGAGAATACCGCGTCAGATGCACTATACACTTTAATTCAAAACTTATTCATGGATGAGTGGAAAGTAGATGATGCACAAGGTGGTCAACTAGGCTCTGAGACAATAGGGGCTTATTTTGCATTAATGAGTGATTGTACTAACACTGTGTTCTCTGGGTGTAAGAATGGTTACGGCTGGGGTGGTATAGATGGTAACAACTCTTGGGGTATTACGGCTATAAATGATTGTGAATTCTTTGCTACATCACTTCACTATAACTGCGCAGACTTTATCATGATTGGTGGTAAGGTTCACAGGGGAAGCGGAATCCATGGTTATGGGCACTTCATAACAGACAAAGTTACGTATCTTATGAAGGCAAGAAAGGATTCTGACTTGAATGATAACATAGTGTACACACGTACAGACTACGGCTCATCTTGGGATGGGACAATAAGCCTGATTAGCCCTCAAATAACACTAAAGCCGACTATGAGCAAGATTAATTACGTTTACATCCAAGGCGCGAAAACAGATCCATCTAAGCGCGGTGTTATTGAGAATTACGTTCCTGATGTGCTTATAGACAACCCTATCATGAGAGTAATTGGTTCTTCGGTTAATAACATTGATGTTAACGCAATCTTCTTAGAGTGTTCTGATGCAAACTCTGCATGGTATGACTACACGTATGCGCCGGAGTATTTCAGAATTACAAACTCTTACGCATCTTCCAATAACTACGTCAGATACAGCTCACTAACTAATGAGTTTGACCATACATCCGGCAAGTATCTCAAGAAGAAGTCTGATTACTTCTATTGCGATGTGATAAATGCTCAGGCGAAACTTAACCCATCATTCGCAGCATCTTGGTCACAAGCGGGATTCGTAGCCAACGTGCAAACTTTAGTATTCCCGAAAGCGCTAGGAATAAAGCAAACCTACAACGTAACAAACTGTGATATGCACGGCTTCATGTTAAGGTGCACTGAGAACATTACAGTTAACATAAGCGGGGGCGCTATAGTGCAGCCGTTCCGGTCGCCCGTAGGAGCTCAAGGTAATATTCAAAACTATGACCCTGACTCCTCTTTCAATGTTTCCGACTGTAGGGCGATTAAGGTTTGGGATGTTACAGGAAGCTCCGTGTTTGACACACTAGTGATAGGGGTTAACTGGGATAACGTTATTTTTGATTGGGCTAGTTATTTCACACAAGCTGAACCATCGACAAGTGACCCGCTATTCTCGACACAATTCATTGCACAAACAGTGTCGATGCGAGGTTGTAAAATACAGCAACCTAGATACCCAGCGAAAGAAACGGTAACAACGCAAGTCAAGGACTTAGTTACTAACGGTTACGGTGACACTACACACTACTTGGCTTCTCAGCAGTAG

Tertiary structure

PDB ID
15037892caefdd30b60d29dbe1119cc77113dfbd880ccdeca6be5070a9e12d24
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2429
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence analysis of Vibrio alginolyticus lytic phage vB_ValP_VA-RY-3 Ren,Y., Xu,Y. and Wang,L. 2021-04-02 — GenBank