Protein

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Genbank accession
QGZ15924.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,73
Protein sequence
MHLPNGAQIFVETSRGEEIEATAVTNAKNPIATVASKGDLAKGDYVIVTQSTWAKMVSRVLIVTDAQETSITLAGIDTTDALVFPAGGTMSFAKITGWTEIPCVQEIGQDGGEQQYYTYQCLSDDKEQQIPTFKSAISLTYTFAHEFDNPIYPILRKLDSSGQVTAVRMYVPKANEMRMWAGILSFNDIPSTQVNEMETVQLAVSLKGDFTFVSSALASPGA
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24090,97070 Da
isoelectric point:4,60199
aromaticity:0,08559
hydropathy:-0,05541

Domains

Domains [InterPro]
IPR014918
51–214
IPR014918
QGZ15924.1
1 222
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sfin-6
[NCBI] 		2608403 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ15924.1 [NCBI]
Genbank nucleotide accession
MN393473.1 [NCBI]
CDS location
range 16584 -> 17252
strand -
CDS
ATGCACTTACCAAATGGCGCGCAAATTTTCGTGGAAACCTCTCGCGGAGAAGAGATCGAGGCGACCGCTGTCACTAACGCAAAAAATCCTATTGCTACGGTTGCATCTAAGGGCGACTTGGCGAAAGGTGATTACGTTATTGTAACTCAGTCAACTTGGGCTAAGATGGTTAGTCGAGTACTAATTGTTACTGACGCCCAAGAAACAAGCATTACTCTTGCTGGGATTGACACTACTGATGCTCTTGTTTTCCCGGCTGGCGGTACAATGAGCTTTGCAAAAATTACTGGCTGGACTGAGATCCCTTGCGTACAGGAGATTGGTCAGGACGGCGGCGAGCAGCAGTATTACACTTATCAGTGTTTGTCTGACGATAAAGAGCAGCAGATCCCGACGTTTAAGTCTGCAATCTCGCTAACGTACACCTTCGCGCACGAATTTGATAACCCTATCTATCCTATTCTGCGTAAGCTGGATTCTTCTGGTCAGGTAACTGCGGTTCGGATGTATGTTCCAAAAGCGAACGAGATGCGCATGTGGGCTGGTATCTTGTCTTTTAACGACATTCCATCTACGCAAGTAAACGAAATGGAAACGGTACAACTCGCCGTATCCCTGAAGGGTGATTTCACTTTCGTTTCATCCGCTCTGGCATCACCTGGTGCCTAA

Tertiary structure

PDB ID
e5bc716f55964dfdd20d1598b7334b50de63f6c57266532e2abdd429ba9c389d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9590
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of phage Sfin-6 Ahamed,S.T. and Giri,N. 2019-08-22 — GenBank