Protein

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Genbank accession
XNS40067.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSNNTYQHVSNESRYVKFDPTGTNFPAEITDVQAAIAAISPAGVNGVPDASSTTKGILFLATEQEVIDGTDNTKAVTPATLATRLSYPNATETVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESSNGVIKISSLPQALAGADDTTAMTPLKTQQLAIKLIAQIAPSETTATESDQGVVQLATVAQVRQGTLREGYAISPYTLMNSTATEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPASQRNSKYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55782,10210 Da
isoelectric point:6,68116
aromaticity:0,06452
hydropathy:-0,38880

Domains

Domains [InterPro]
IPR015173
246–326
IPR015173 IPR037053 IPR044916
SSF69349
246–326
SSF69349 SSF88874
G3DSA:2.10.280.10
246–286
G3DSA:2.10.280.10 G3DSA:2.160.30.10 IPR011083 IPR027448
XNS40067.1
1 527
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SholemSchwarzbard
[NCBI] 		3233709 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS40067.1 [NCBI]
Genbank nucleotide accession
PP925840 [NCBI]
CDS location
range 88301 -> 89884
strand +
CDS
ATGAGTAATAATACATATCAACACGTTTCTAATGAATCTCGCTATGTAAAATTTGATCCAACCGGTACAAATTTTCCGGCAGAGATTACTGATGTTCAGGCTGCTATAGCAGCCATTTCTCCTGCTGGTGTAAATGGAGTTCCTGACGCATCATCAACAACAAAGGGAATTTTATTTCTTGCCACTGAACAGGAAGTTATCGACGGAACTGATAATACCAAAGCAGTTACACCAGCAACGCTGGCAACAAGATTATCTTATCCAAACGCAACTGAAACTGTTTATGGATTAACAAGATATTCAACCAATGATGAAGCAATTGCCGGAGTTAATAATGAATCTTCTATAACTCCTGCTAAATTTACTGTTGCCCTTAATAATGCCTTTGAAACTCGTGTTTCAACTGAATCATCAAATGGAGTTATTAAAATTTCATCTCTACCGCAAGCATTAGCTGGCGCAGATGATACTACTGCAATGACTCCGTTAAAAACACAGCAGTTAGCTATTAAATTAATTGCGCAAATCGCTCCTTCTGAAACCACAGCTACCGAATCTGATCAAGGTGTTGTTCAATTAGCGACAGTAGCTCAAGTTCGTCAAGGAACATTAAGAGAAGGCTATGCAATTTCTCCTTATACGTTAATGAATTCTACTGCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACACAATCAGAAGTTAACTCGAATAATGCTTCTGTTGCGGTTACTGGCGCAACTCTTAATGGTCGTGGTTCTACAACGTCAATGAGAGGCGTAGTTAAATTAACTACAACCGCCGGCTCACAGAGTGGAGGTGATGCTTCATCAGCACTAGCTTGGAATGCTGACGTTATCCACCAAAGAGGCGGTCAAACTATTAATGGAACACTCCGCATTAATAACACGCTCACGATAGCTTCAGGTGGAGCAAATATTACCGGAACAGTTAACATGACCGGTGGTTATATTCAAGGTAAGCGTGTCGTAACACAAAATGAAATTGATAGAACTATTCCTGTCGGAGCTATTATGATGTGGGCCGCTGATAGTCTTCCTAGTGATGCTTGGCGTTTTTGCCATGGTGGAACCGTTTCAGCGTCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATACGGCGGAAGTTCATCAAATCCTGGATTACCTGATATGCGTGGTCTTTTTGTTCGTGGCTCTGGTCGTGGCTCTCACTTAACAAATCCAAATGTTAATGGTAATGACCAATTTGGTAAGCCTAGATTAGGTGTAGGTTGTACTGGTGGATATGTTGGCGAAGTGCAAAAACAGCAGATGTCTTATCATAAACACGCTGGCGGATTCGGTGAGCATGATGATTCTGGAGCATTCGGTAATACCCGTAGATCAAATTTTGTTGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATATTTCACCAATGACGGATATGAAATTGACCCAGCATCACAACGAAATTCCAAATATACACTAAATCGTCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Tertiary structure

PDB ID
07a2d520b37ff9324c4d2424295387603aae906f0d6c8aaa50386631c37faca9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50