Protein

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Genbank accession
ATN48474.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MATLDTFSWCTQVQGGGGSLTTTNNDRSIQFGNGYMQLASSGFNTTRREYSVVYAGEDFMSVYDFCNSHRIKPFAWTPPDGKIGVWVVKPNSLGAKPVSRDVMEINVTFMEQFTSME
Physico‐chemical
properties
protein length:117 AA
molecular weight: 13041,49940 Da
isoelectric point:5,28730
aromaticity:0,12821
hydropathy:-0,30427

Domains

Domains [InterPro]
IPR010265
5–113
IPR010265
ATN48474.1
1 117
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sfin-1
[NCBI] 		2024314 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN48474.1 [NCBI]
Genbank nucleotide accession
MF468274.1 [NCBI]
CDS location
range 42615 -> 42968
strand -
CDS
ATGGCGACGCTTGACACTTTCAGTTGGTGTACGCAGGTTCAAGGGGGTGGCGGCTCACTTACCACTACCAACAATGACAGATCCATACAGTTTGGAAACGGCTACATGCAGCTTGCATCTTCTGGATTTAACACCACGCGACGCGAGTATTCAGTTGTCTATGCTGGGGAAGATTTCATGTCTGTTTACGACTTCTGCAACTCTCACCGCATAAAGCCGTTCGCATGGACTCCACCGGACGGTAAGATCGGGGTATGGGTAGTCAAGCCTAACAGCTTGGGTGCGAAGCCAGTATCACGCGACGTGATGGAGATTAACGTCACGTTTATGGAGCAGTTTACATCTATGGAGTAG

Tertiary structure

PDB ID
e83d949c2c72ec7169ab88477a32ba35e52e67bc46ba282f71e2f14548a5a3f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel bacteriophage with broad spectrum lytic activity against Shigella sp. and E.coliC Tousif,A.S.K. and Nabanita,G. 2023-11-29 — GenBank