Protein

View in Explore
Genbank accession
BAU40202.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MDSSKIYFKFLGGPSLMPSGTNAHMPGTCVEHLTLSGPGSVTGTGESFYQSQTFEANRNGIFRDLHIEKFDKAGIIITDSYDNYFSNIRFWNIGDTTTYGWGILHDRVNWAANNGYCSTGNHYENISCMHIYRGIGVTPGNQIIEGHFYRITGEFCDGTVETYAGTAPSGGWAGTNSFIGTYSEMNTSFGIKSPNGTEIEVYAATYPGSGNNQSNYSGAYVRMLNGVLSVGNGGTGNNSYMRFLKTNGSTGSTLQYNNSLSKTQILSSNGTAMLSVYDGIAGGGTSYTQFADPSDTTKARVYYGVGTNAFIDYGIQNTSAFTFNGNVYFTNPVTFNGTHTVTNAANPQTVYKSTNAATTTFYAGVNGTAQAFVLYDQIGATTIASFYSVAGGNKINLAVPTTINATATITGAVTLNSSLALTTTANPTTTYTSSSGTNMSVGVNGASGAVSIFDIVGGVSVARFNSLANGGKLVVSYGLTAMRTGANPTVGTATLVAGVVTVNTTAVNANSKIFVSRNTPGGTVGNLYAQTADIVAGTSFKITSSSNTDTSTVNWFIVDGI
Physico‐chemical
properties
protein length:561 AA
molecular weight: 58734,06980 Da
isoelectric point:6,23259
aromaticity:0,11052
hydropathy:-0,09305

Domains

Domains [InterPro]
IPR056204
487–558
IPR056204
BAU40202.1
1 561
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSP15
[NCBI] 		1785960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAU40202.1 [NCBI]
Genbank nucleotide accession
LC121084 [NCBI]
CDS location
range 165845 -> 167530
strand -
CDS
ATGGATTCATCAAAAATCTATTTCAAATTTCTTGGCGGTCCTTCTTTGATGCCAAGTGGTACGAATGCCCACATGCCGGGAACTTGTGTTGAACATCTGACCCTTTCAGGTCCGGGTTCTGTGACTGGAACGGGTGAATCGTTCTACCAAAGCCAAACATTTGAAGCAAACCGTAATGGTATCTTCCGTGATCTGCATATTGAGAAATTCGATAAAGCTGGTATTATCATCACGGATAGCTATGACAACTATTTCAGCAATATTAGATTCTGGAACATTGGTGATACGACAACATACGGTTGGGGTATTCTGCATGATCGTGTGAATTGGGCTGCTAATAATGGCTACTGCTCAACTGGTAACCACTATGAAAATATCTCTTGCATGCATATCTACAGAGGTATTGGTGTTACTCCGGGCAACCAGATTATTGAAGGTCACTTCTATAGAATCACGGGTGAATTCTGTGATGGTACAGTAGAAACATATGCCGGGACTGCTCCTAGTGGTGGTTGGGCTGGAACAAACTCATTCATCGGAACTTATTCGGAAATGAATACCTCATTCGGTATTAAATCTCCGAACGGTACTGAAATTGAAGTTTATGCGGCTACCTATCCGGGTAGTGGTAACAACCAATCGAACTATTCCGGTGCATATGTGAGAATGTTGAATGGTGTATTGTCTGTTGGTAATGGTGGTACGGGTAATAATTCTTACATGAGATTCCTCAAAACCAATGGTTCTACAGGTTCAACGCTTCAATACAACAATTCACTTTCAAAGACACAGATTCTGTCATCAAACGGAACTGCGATGTTGAGTGTTTATGATGGTATTGCTGGTGGTGGAACATCATATACACAATTTGCTGATCCATCTGACACAACAAAGGCCCGTGTTTATTACGGTGTTGGTACGAATGCTTTCATTGATTATGGTATTCAAAATACTTCTGCATTCACATTCAATGGAAACGTTTATTTTACCAATCCGGTCACTTTCAATGGAACACACACAGTAACGAACGCTGCCAACCCGCAAACCGTCTATAAATCGACCAATGCGGCAACCACAACGTTCTATGCTGGTGTCAATGGAACTGCACAGGCATTTGTTCTTTACGATCAGATTGGAGCAACTACAATCGCTTCTTTCTATTCGGTTGCTGGTGGTAACAAGATTAACCTTGCTGTACCAACGACGATCAATGCAACAGCCACAATTACCGGTGCTGTGACGTTGAATTCAAGCTTGGCTCTGACTACAACGGCTAACCCAACCACAACATACACATCATCTAGCGGTACTAATATGTCAGTTGGTGTGAATGGTGCTTCTGGTGCCGTTTCAATCTTTGATATTGTTGGTGGTGTTTCGGTCGCTAGATTTAACTCTCTTGCCAACGGTGGTAAGTTGGTTGTGAGTTATGGTCTAACAGCGATGAGAACGGGCGCTAACCCAACAGTCGGGACGGCAACTCTTGTTGCGGGTGTGGTGACTGTGAATACCACTGCGGTAAACGCAAACAGCAAAATCTTTGTTTCCCGGAATACTCCGGGTGGTACGGTTGGTAACTTGTATGCACAAACCGCTGATATCGTTGCGGGAACGTCATTCAAGATTACATCGTCATCAAACACGGATACATCAACAGTGAATTGGTTCATTGTGGATGGTATCTAA

Tertiary structure

PDB ID
a6123c2d05e3389b26a318ea1b905329d887fe278e477c1016d09d53bdede12a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RSP15 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank