Protein

View in Explore
Genbank accession
CDL65236.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAANELIPWINSAGEGGVRNSMQEYPGKGTNGPFEFNFAGGYIDPSHVKAYRYDPVSARTYPQTLTFLGPNQVRTSDVIPVGQYVVLYRDTPKNQPLVDYSEGAVMDEANLDKSNDQSVFIAAEMLDRFDAINATSSEAIDRSVTALNTANSALSKSDTAIKTADAATATAGSAVITANGAVTTANAATQTANGAKATAEGIDAKAQSALDASANAVTTANGAKATANAIDGKAQSALDASTNAVNTASAANTKADGAVATANAVGSKADSAVSTANGAKETADAASAAVGSKVNRAGDTMTGALKNTTASGSGAAGAFHTTGDIGGAFVDWVNARIYGVQVDAARSTSAYGGIRWTRWGGRHLAAIDAYEGGSGSTQPTIVMQLANVTNAWTFSPYDISRGAGGYVWGSWNFDPNSKANVGGQIFTGEIGSRLNGDQGYYGRFGQGYIKLARWDYGGYIDLMRAQDQDYRWRIHYEYNGDNLELMSNGGQTFTFTRDGNIYCGGRGWVWGSIDARAWAGARVQWDSGAIEVGPIGNGTIDLPAPYVCVGARTCGGSSTANCIWLRGVILRNQ
Physico‐chemical
properties
protein length:573 AA
molecular weight: 59644,76460 Da
isoelectric point:5,21358
aromaticity:0,08901
hydropathy:-0,27818

Domains

Domains [InterPro]
IPR005604
21–130
IPR005604
CDL65236.1
1 573
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Bp-AMP3
[NCBI] 		1673729 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CDL65236.1 [NCBI]
Genbank nucleotide accession
HG796220 [NCBI]
CDS location
range 39534 -> 41255
strand +
CDS
ATGGCTGCAAACGAACTCATTCCGTGGATTAATTCGGCGGGTGAGGGCGGGGTTCGGAACTCGATGCAGGAGTACCCCGGCAAAGGCACGAATGGTCCCTTCGAGTTCAACTTCGCAGGCGGCTATATCGACCCGTCGCACGTCAAGGCTTACCGCTACGATCCCGTATCGGCCCGGACGTACCCGCAAACCCTCACCTTTCTCGGCCCCAATCAAGTCCGCACGTCGGACGTGATCCCTGTGGGCCAGTATGTCGTGCTGTACCGCGACACCCCAAAGAACCAACCGCTTGTCGATTACAGCGAAGGTGCTGTGATGGACGAAGCGAACCTCGACAAGAGCAACGACCAGTCCGTGTTCATCGCGGCTGAAATGCTCGACCGATTCGACGCGATCAACGCAACCTCAAGCGAGGCTATCGACCGTTCGGTGACTGCGCTGAACACGGCGAACTCCGCGCTCTCGAAGTCGGACACGGCAATCAAGACAGCCGACGCCGCAACCGCAACCGCTGGTAGCGCCGTCATCACGGCGAACGGCGCGGTGACTACCGCGAACGCGGCGACTCAAACGGCCAACGGTGCCAAGGCAACCGCCGAGGGCATCGACGCGAAGGCACAATCCGCGCTCGACGCGTCGGCCAACGCCGTCACAACCGCCAACGGTGCGAAGGCAACCGCCAACGCGATTGACGGTAAGGCGCAGTCGGCACTCGATGCCTCGACCAACGCGGTCAACACCGCGAGCGCCGCGAACACCAAGGCCGATGGCGCAGTCGCAACCGCGAACGCAGTCGGCTCTAAGGCCGATAGCGCGGTGTCCACCGCCAACGGCGCGAAGGAGACCGCCGACGCCGCAAGTGCTGCCGTCGGTTCCAAGGTGAACCGCGCAGGCGACACGATGACCGGTGCGCTAAAGAACACCACTGCCAGCGGGAGCGGCGCGGCTGGCGCGTTCCATACCACCGGTGACATTGGTGGCGCATTCGTTGATTGGGTCAACGCCCGCATCTACGGGGTGCAGGTTGACGCCGCGAGATCAACTTCGGCGTACGGCGGCATTCGATGGACCCGTTGGGGCGGTCGTCACCTCGCAGCTATTGACGCATACGAGGGCGGTAGCGGTTCGACGCAGCCAACTATCGTGATGCAGCTTGCGAACGTGACAAACGCGTGGACGTTCAGCCCGTACGATATCAGCCGTGGCGCAGGTGGCTATGTGTGGGGATCGTGGAACTTCGACCCGAACAGCAAGGCTAACGTCGGCGGTCAAATCTTCACAGGCGAGATCGGCTCGCGCCTCAACGGCGACCAAGGCTACTACGGGCGCTTCGGTCAAGGCTACATCAAGCTGGCCCGGTGGGACTACGGCGGCTACATCGACTTGATGCGCGCTCAGGACCAAGACTATCGCTGGCGCATTCACTACGAATACAACGGCGACAACCTTGAGTTGATGTCGAACGGCGGGCAGACCTTCACGTTCACTCGTGACGGGAATATCTACTGCGGCGGTCGCGGATGGGTGTGGGGTTCCATTGATGCCCGAGCTTGGGCGGGTGCCCGAGTGCAGTGGGACAGCGGCGCGATTGAAGTTGGCCCTATCGGCAACGGCACTATCGACCTCCCTGCTCCGTATGTTTGCGTCGGTGCTCGCACCTGCGGCGGCTCGTCCACAGCGAACTGTATTTGGCTGCGCGGCGTCATTCTGAGGAACCAATGA

Tertiary structure

PDB ID
29b50330a4f4e43a2fe1aa3039392302de58bf18429c0fc026f4919d98c47249
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6496
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel phages display a temperature dependent lifestyle choice that underpins the population dynamics of a tropical bacterial pathogen Shan,J., Korbrisate,S., Adler-Lazer,N., Clokie,M. and Galyov,E. 2014-11-14 — GenBank