Protein

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Genbank accession
XLD54476.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MATAIDPDLQAQLDKLTVAVQLIHDFGMSDDPSIPNPEGGVIRTLEGINEAINEAIPNFEDANQAAIEARAARDAAQLAQQKAEDAAASASNSSTSALYAFGNVASAPTVTIPASSKTVVNVTLNAVTTQINIGAVTDPATIARQITIAVKQGTGSNKATWDSRIKWANNRKPVLSFLVGYEDFVTLITRDSGNTWTGFFNGGWVG
Physico‐chemical
properties
protein length:206 AA
molecular weight: 21660,85870 Da
isoelectric point:4,62166
aromaticity:0,06311
hydropathy:-0,07718

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage VB_ST-SA173
[NCBI] 		3366564 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLD54476.1 [NCBI]
Genbank nucleotide accession
PQ351918.1 [NCBI]
CDS location
range 3277 -> 3897
strand +
CDS
ATGGCAACAGCAATCGACCCGGATTTGCAAGCACAGCTTGATAAGCTAACTGTTGCGGTTCAGCTTATCCATGACTTCGGTATGTCTGACGACCCGAGCATACCTAACCCAGAAGGCGGTGTAATCCGTACGCTGGAAGGTATTAACGAAGCAATCAACGAAGCTATTCCAAACTTCGAAGATGCTAACCAGGCAGCTATTGAAGCACGAGCAGCCAGGGACGCAGCTCAGTTAGCTCAGCAAAAGGCAGAAGACGCGGCTGCATCCGCTTCAAACTCTTCTACCTCAGCACTGTATGCTTTTGGTAACGTAGCAAGTGCGCCGACTGTTACTATACCTGCTTCGTCTAAAACTGTTGTTAACGTTACGCTCAACGCTGTAACTACTCAGATTAATATTGGTGCTGTAACTGACCCAGCTACTATAGCCCGTCAGATTACTATTGCTGTGAAGCAGGGCACAGGTTCCAACAAAGCTACCTGGGACTCGCGTATCAAATGGGCAAACAACAGAAAGCCCGTGCTTTCATTCCTTGTGGGTTACGAGGACTTTGTTACGCTTATTACCCGTGACTCCGGTAACACATGGACTGGCTTCTTTAATGGTGGATGGGTTGGCTAA

Tertiary structure

PDB ID
c6123662c8ad0d7a3df9bf19bfb3dbe7417d4ad26bbe9ad0745a54a5036b46df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9087
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella phage VB_ST_SA173 Sherif,M.M., Abdelaziz,N.A., Saleh,S.E. and Aboshanab,K.M. 1988-03 — GenBank