Protein

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Genbank accession
CAB4220589.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect2
Probability 0,63
TF
Evidence Phold
Probability 1,00
Protein sequence
MADTGPTGDTGPTGDTGPTGDTGPTGDTGPTGPVGFTGPTGRQGATGFTGPTGATGLRGTTGATGETGDTGSTGPTGATGLIGPTGASGPTGARGTTGMTGPTGASGPTGPTGSTGPIGPRGATGAVGSTGATGISGDPGGDTGATGATGITGDTGPTGSTGATGAGATGSTGDTGPTGDTGSIGETGPTGAGDTGPTGDTGPTGATGPIGETGPTGAGDTGPTGADSTVMGPTGDTGPTGDTGPTGAGDTGSTGDTGPTGDTGPTGDTGPTGDTGPTGADSTVMGPTGDTGPIGDTGPTGAGDTGPTGPTGDTGPTGDIGPTGAGDTGPTGPTGDTGPIGITGDTGPGVGETGPTGDTGPTGDTGPTGPQPVVSYGSLIRTAVGPTITIDFSADGIVRFQNSGGLANITIAFTGYTTGKRITVIIQHTDETSNTFITLGVPPEQSVAGDIVVISGKVAQFLDYVCFDAAATTEGVFCFSGPLPLA
Physico‐chemical
properties
protein length:486 AA
molecular weight: 44212,33750 Da
isoelectric point:4,05003
aromaticity:0,02675
hydropathy:-0,35021

Domains

Domains [InterPro]
IPR050938
4–373
IPR050938
IPR008160
5–56
IPR008160
CAB4220589.1
1 486
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4220589.1 [NCBI]
Genbank nucleotide accession
LR797503 [NCBI]
CDS location
range 5923 -> 7383
strand -
CDS
ATGGCAGACACTGGCCCAACAGGTGATACCGGCCCAACAGGTGATACCGGCCCAACAGGTGATACCGGCCCAACAGGTGATACCGGCCCAACAGGCCCAGTTGGTTTTACTGGTCCTACTGGGCGCCAAGGCGCAACAGGTTTTACTGGTCCTACTGGTGCTACCGGTTTAAGAGGTACAACAGGTGCTACCGGCGAAACTGGAGATACTGGTTCTACCGGCCCAACTGGTGCCACTGGACTAATTGGGCCAACCGGCGCTAGTGGCCCTACTGGGGCAAGGGGTACCACCGGAATGACTGGACCAACTGGTGCTAGTGGCCCCACTGGCCCTACTGGTTCTACTGGCCCCATTGGCCCGAGAGGTGCTACTGGTGCTGTAGGTAGTACAGGTGCTACTGGTATTTCCGGCGACCCCGGTGGTGACACCGGAGCAACGGGTGCTACTGGAATTACAGGTGACACCGGCCCAACAGGTTCTACCGGGGCAACAGGTGCCGGAGCTACTGGTTCAACGGGTGATACAGGCCCAACGGGTGATACAGGATCAATTGGAGAAACGGGCCCAACAGGCGCAGGTGATACTGGACCTACTGGAGATACAGGTCCAACCGGAGCCACTGGACCAATTGGAGAAACAGGTCCAACAGGCGCAGGAGACACAGGTCCAACTGGTGCCGACAGTACAGTAATGGGCCCAACGGGCGATACTGGCCCAACGGGTGATACTGGCCCAACAGGTGCGGGTGATACTGGATCAACCGGAGACACCGGCCCAACAGGCGATACAGGTCCGACTGGAGACACAGGCCCAACAGGCGATACAGGTCCGACTGGCGCCGACAGTACAGTAATGGGCCCAACCGGAGACACAGGACCTATAGGTGATACTGGCCCAACCGGAGCCGGGGATACAGGACCAACTGGCCCAACAGGCGATACTGGCCCAACAGGTGATATTGGCCCAACAGGTGCAGGAGACACAGGACCAACTGGACCAACAGGCGATACTGGACCAATTGGTATAACAGGTGATACTGGCCCAGGTGTTGGGGAAACAGGCCCAACGGGCGATACTGGCCCAACGGGTGATACTGGACCTACCGGGCCGCAACCTGTTGTAAGTTATGGTTCACTAATAAGAACTGCCGTTGGACCAACTATAACTATAGATTTTAGCGCAGACGGAATAGTACGATTTCAAAATTCTGGGGGTTTAGCAAATATAACTATTGCCTTTACTGGATACACAACCGGTAAACGAATTACAGTTATTATACAACACACCGATGAAACTTCAAACACTTTTATAACTCTTGGTGTACCGCCAGAACAAAGTGTAGCAGGGGATATTGTTGTAATTAGTGGTAAAGTAGCACAATTTTTAGACTATGTTTGCTTTGATGCAGCCGCAACTACAGAAGGTGTCTTTTGCTTTAGCGGCCCTCTTCCATTGGCTTAA

Tertiary structure

PDB ID
ba98982da899ebd82b2b9a7790b0b645219f751b1880d222782a6595d48a492f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5751
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50