Protein

View in Explore
Genbank accession
WNO23386.1 [GenBank]
Protein name
central spike protein
RBP type
TSP
Evidence DepoScope
Probability 0,86
Protein sequence
MIVDEFSSVYECLLYCYKMVKRSEQLNGRRVFPILSVVTNNNDPEGRRRVKIADPLFGNLIESNWIRPIRVSQNQDNPLPQINQMVIVWFVDGDSEKGYYLPIINDANPSREKDDPVNDSAVRIEGNNTIRIDKNDSETVGGNQTVAIAGEQNINVDGNLIENIGGDIDQNVTGKIEVRSESTILIDADGTIIIKNDSGAFISLGGNGEVLIQDSQGRKIRLGGAFNSTWDLNGLPMAFINATSVTIAGKQIATVGAVDTRGDTIVNKGW
Physico‐chemical
properties
protein length:270 AA
molecular weight: 29580,82420 Da
isoelectric point:4,64388
aromaticity:0,05926
hydropathy:-0,29593

Domains

Domains [InterPro]
IPR037026
30–108
IPR037026 SSF69349
IPR006531
36–102
IPR006531
WNO23386.1
1 270
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Anabaena phage A-1(L)
[NCBI] 		3075938 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO23386.1 [NCBI]
Genbank nucleotide accession
OR360731 [NCBI]
CDS location
range 21498 -> 22310
strand +
CDS
ATGATAGTTGATGAATTTTCCAGTGTTTACGAATGCTTATTGTATTGTTACAAAATGGTAAAGCGTTCAGAGCAACTGAACGGCCGTCGAGTGTTTCCTATTTTGTCAGTGGTTACAAATAACAACGATCCAGAAGGAAGAAGGAGAGTTAAAATCGCTGACCCTCTTTTCGGTAATTTGATCGAATCGAACTGGATAAGACCGATTAGAGTAAGCCAAAATCAAGATAATCCTTTGCCACAAATTAATCAAATGGTTATCGTTTGGTTTGTCGATGGGGACAGTGAAAAAGGTTATTATTTACCGATTATTAACGATGCCAATCCTTCACGGGAAAAAGATGATCCGGTCAATGATAGCGCTGTCAGAATTGAAGGTAATAACACCATTCGCATTGATAAAAACGATTCTGAAACTGTTGGTGGTAATCAAACCGTGGCGATCGCTGGTGAGCAAAATATAAACGTCGATGGGAATTTGATTGAAAACATCGGAGGAGATATTGACCAGAACGTTACAGGCAAAATAGAAGTTAGAAGCGAATCTACAATACTTATAGATGCTGACGGCACAATCATCATTAAGAATGACTCCGGGGCGTTTATCAGTCTTGGGGGCAACGGTGAAGTGCTGATCCAAGATTCACAGGGACGAAAAATACGTTTAGGTGGTGCGTTCAATTCTACATGGGATTTAAACGGTTTGCCTATGGCGTTCATAAATGCAACTTCAGTTACTATTGCAGGTAAGCAAATCGCAACTGTCGGTGCTGTCGATACGCGTGGCGACACAATCGTTAATAAAGGATGGTAG

Tertiary structure

PDB ID
40dc4ff8dfd3764db673324841d3e3c811c9240b4dc7fd9c489777ec094a135c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7584
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Structure of the intact tail machine of Anabaena myophage A-1(L) Yu,R.-C., Yang,F., Zhang,H.-Y., Hou,P., Du,K., Zhu,J., Cui,N., Xu,X., Chen,Y.-X., Li,Q. and Zhou,C.-Z. 2024 38531972 GenBank