Protein

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Genbank accession
YP_009597136.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MTNIPKQNKFAYTEDKPKYIDINGTTNYILPGFEYPSDVAVKFPQFFGGKDNVFYPDLQVTLAPDSLTFENSKKSQAITYTATDGSSITSAVVTIEPSDLATWNEGDKTFTGNEEGSGKAIFELTDDKGRTAIKELPLTVTKATVVTTLTLSPDNLTFANASAAMQEVTVTTNASDFMLEFNNQNIQAVKSGNKIQVTPKTGKTGSFTITVKAQASGGNQVSKTLNITVNAGG
Physico‐chemical
properties
protein length:233 AA
molecular weight: 24979,57870 Da
isoelectric point:4,96650
aromaticity:0,08584
hydropathy:-0,33562

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage vB_CjeM_Los1
[NCBI] 		1904491 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009597136.1 [NCBI]
Genbank nucleotide accession
NC_041896 [NCBI]
CDS location
range 23521 -> 24222
strand +
CDS
ATGACTAATATACCAAAACAAAATAAATTCGCTTATACAGAAGATAAACCTAAATATATAGATATTAATGGTACAACTAACTATATTTTACCTGGATTTGAATATCCATCAGATGTAGCAGTTAAATTTCCACAATTTTTTGGTGGTAAAGACAATGTTTTTTACCCAGACTTACAAGTAACTTTAGCACCTGATAGTTTAACTTTTGAAAATAGTAAAAAATCACAAGCAATAACTTATACAGCTACTGATGGGTCATCAATTACATCAGCTGTTGTAACAATAGAACCAAGTGATTTAGCTACATGGAATGAAGGTGATAAAACATTTACAGGAAATGAAGAAGGTTCAGGTAAAGCTATATTTGAACTTACAGATGATAAAGGTAGAACAGCTATAAAAGAATTACCTTTAACTGTTACAAAAGCAACAGTAGTAACAACTTTAACTCTTTCACCTGATAATTTAACTTTCGCTAATGCAAGTGCTGCAATGCAAGAAGTAACAGTTACAACTAATGCTTCAGATTTTATGTTAGAATTTAATAATCAAAATATACAAGCTGTTAAATCAGGTAATAAAATTCAAGTAACTCCAAAAACAGGTAAAACTGGATCATTTACAATCACAGTTAAAGCACAAGCTAGTGGTGGAAATCAAGTATCAAAAACTCTTAATATAACTGTTAATGCAGGTGGTTGA

Tertiary structure

PDB ID
ee71c92696afebb69d5906fac2f1ac1eb313d1164f47d3fe23e4ff3bdd446d2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of vB_CjeM_Los1, a virulent Campylobacter bacteriophage isolated in the Republic of Ireland Coffey,A., McAuliffe,O. and Bolton,D. 2006-06-30 — GenBank