Protein

View in Explore
Genbank accession
CAB4220329.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRSFKVPVGLLASSSDPTGTTAGETYYNTTSDKIRVYDGSNWQDAGISATDLSTAITGAALDNTDDLPQGTTNLYHTSEHVYDSLVSGSRSNITFSYNSVPKTIDVSVPTVQGTQGTQGSAIQGTTGTQGAVGSQGAVGSQGTVGSQGTTGAQGTTGNTGSQGTQGTTGSQGTTGTTGSQGATGSQGTTGTTGSQGATGSQGTTGTTGSQGTTGSQGTTGSQGTTGTQGTTGQNGNFGGATFDYTFSTTTTASDPGTGNLRFNNATPTSATAMYIDSSNDAATDISSFLNTIDDSTSTIKGHFRVSKKYDASVFKLYTISSLTDNTGWFTVNCAYVSGNGTLANTDDIVITFARTGDMGSTGSQGTTGTTGSQGTTGSQGTTGTTGSQGTTGTTGTQGTTGSQGTTGSQGTVGAQGTTGSQGTTGAQGTTGSQGATGSQGTVGSQGTTGSQGTVGSQGAVGSQGATGSQGSVGSQGTVGSQGTTGSQGTIGAQGSVGSQGLNGTQGATGSQGTTGSQGTVGSQGAVGSQGTTGSQGTTGSQGATGAQGTVGSQGTTGSQGTQGVQGTVGSQGLNGTQGTVGTAGQNGNFGGASFDYTYSTTTTATDPGTGKVQFNNATLSSATAVYLDSSNDAATDITSFLNTIGTSTSTIKGHFRMSKKFDDSSFALFTISSVTNNTGWFTVSASYVSGNGTFTNLDDIVITFARTGDKGDTGAQGANGTQGTLGSQGATGTQGTVGSQGATGSQGATGSQGSVGSQGSVGSQGSVGSQGSQGSVGSQGTVGTQGTVGTQGTVGTQGTVGSQGTLGTQGTIGTTASDPTVTVLLFGGM
Physico‐chemical
properties
protein length:830 AA
molecular weight: 79664,77210 Da
isoelectric point:4,37697
aromaticity:0,04940
hydropathy:-0,44843

Domains

Domains [InterPro]
IPR008160
182–239
IPR008160 IPR050938 IPR008160
IPR008160
357–412
IPR008160 IPR008160
CAB4220329.1
1 830
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4220329.1 [NCBI]
Genbank nucleotide accession
LR797501 [NCBI]
CDS location
range 3025 -> 5517
strand +
CDS
ATGACTCGTAGTTTTAAAGTACCTGTAGGGTTACTGGCTTCTTCCAGTGACCCTACGGGTACTACTGCTGGAGAGACCTACTACAACACTACCAGCGACAAGATCCGTGTTTACGACGGAAGTAACTGGCAAGACGCTGGTATATCTGCTACAGATCTTTCTACTGCTATTACTGGAGCCGCATTAGATAACACAGATGATCTTCCTCAAGGAACAACTAATCTTTACCATACTTCTGAGCATGTCTATGATTCTTTAGTAAGTGGTAGTAGAAGTAACATAACTTTTTCTTACAACTCTGTTCCAAAAACAATTGATGTATCTGTACCAACAGTTCAAGGAACTCAAGGTACACAGGGTTCAGCAATTCAAGGAACTACGGGAACACAAGGCGCTGTAGGTAGCCAGGGAGCCGTTGGTAGCCAAGGTACCGTAGGATCACAAGGAACTACAGGGGCTCAAGGCACAACTGGTAATACAGGAAGCCAAGGCACACAAGGTACAACAGGTTCTCAAGGCACTACAGGAACTACTGGTAGCCAAGGAGCAACTGGTAGCCAAGGTACAACTGGTACTACTGGTAGTCAAGGAGCAACTGGTAGCCAAGGTACAACTGGTACTACAGGTAGCCAAGGAACCACAGGTTCACAAGGTACAACTGGTTCTCAGGGAACTACGGGTACACAAGGCACAACAGGACAAAACGGTAACTTTGGTGGTGCTACATTTGATTACACCTTTAGCACTACTACAACTGCATCTGACCCAGGTACTGGAAATTTGCGCTTTAATAATGCAACTCCAACATCTGCTACTGCTATGTACATTGACTCTAGCAATGATGCCGCAACAGATATATCTTCATTCTTAAACACCATTGATGATTCAACATCAACTATCAAGGGTCACTTCCGTGTATCTAAGAAGTACGATGCCAGTGTATTTAAACTGTACACAATCTCATCATTAACCGATAACACTGGTTGGTTTACTGTCAACTGTGCTTACGTCTCTGGTAATGGAACTCTTGCTAATACTGATGACATCGTTATCACCTTTGCTCGTACTGGTGATATGGGTTCTACTGGTTCCCAAGGAACTACAGGTACAACAGGAAGCCAGGGAACTACTGGTAGCCAAGGCACTACAGGAACTACTGGTTCCCAAGGAACTACAGGAACTACAGGAACTCAGGGCACTACTGGTAGCCAAGGCACTACTGGTAGTCAAGGAACAGTCGGTGCTCAGGGTACAACTGGTAGTCAAGGAACAACTGGCGCACAGGGTACAACAGGTTCTCAGGGTGCTACAGGCTCTCAAGGAACCGTTGGTTCTCAGGGTACTACTGGTTCCCAAGGAACCGTCGGTTCACAAGGTGCCGTAGGTAGCCAAGGTGCTACAGGCTCACAAGGCTCTGTTGGTAGCCAGGGAACTGTTGGTTCACAAGGCACTACTGGTAGCCAAGGAACTATTGGTGCTCAAGGTTCCGTAGGTTCACAAGGTTTAAATGGTACGCAAGGTGCCACTGGTTCACAGGGCACTACTGGTTCACAAGGAACTGTAGGAAGCCAAGGAGCAGTAGGCTCACAAGGCACTACAGGTTCTCAAGGAACTACTGGTTCTCAAGGTGCTACGGGTGCTCAAGGCACTGTTGGTAGCCAAGGAACTACTGGTAGTCAAGGAACGCAGGGTGTTCAAGGAACCGTGGGCTCACAAGGTCTTAATGGTACTCAGGGAACTGTTGGTACTGCAGGACAAAACGGTAACTTTGGTGGTGCTTCATTTGATTACACCTACAGTACAACTACAACCGCAACAGACCCAGGTACTGGAAAAGTTCAATTTAATAATGCAACTTTATCCTCAGCAACTGCAGTCTATTTAGACTCAAGTAATGATGCTGCTACTGATATCACTTCTTTCCTTAACACTATTGGAACATCGACCTCAACCATCAAGGGTCACTTTCGAATGTCAAAGAAGTTTGATGACAGTTCATTTGCACTCTTTACAATTTCATCAGTAACAAATAACACTGGTTGGTTTACTGTAAGCGCATCATATGTTTCTGGAAATGGAACATTTACAAACTTAGATGACATCGTCATTACCTTTGCTCGCACAGGTGATAAGGGTGATACTGGCGCACAAGGTGCTAATGGTACTCAAGGCACACTTGGCTCACAAGGCGCTACTGGTACTCAGGGAACAGTTGGCTCTCAAGGTGCTACAGGGTCACAGGGTGCTACAGGTTCACAAGGCTCTGTTGGTTCTCAAGGTTCTGTCGGTTCTCAAGGTTCTGTCGGTTCTCAAGGTTCTCAAGGTTCTGTCGGTTCTCAAGGTACCGTAGGTACTCAGGGAACAGTAGGTACTCAGGGAACTGTAGGTACTCAGGGAACAGTTGGCTCTCAAGGAACGCTTGGAACACAAGGTACGATTGGAACTACTGCTTCTGATCCAACAGTTACTGTATTACTTTTTGGTGGAATGTAA

Tertiary structure

PDB ID
79a4327bc2b70e2523cd68b2fa1c613e30e28ec20f926803b45bfc222a797186
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2666
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50