Protein

View in Explore
Genbank accession
CAB4154505.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTPRVVVDDTLPVERIVVTGNVQTDPTSRIVVSSEDLPGVTVTNTGDDITVTIGANTAIGPQGATGATGATGPIGATGYTGSRGDTGATGSTGATGPIGATGDTGATGITGATGATGAIGASGALGYTGSIGNTGASGATGASGLLGYTGSQGAIGATGSTGYTGSIGATGATGPIGATGATGITGYTGSQGIQGIQGIQGVIGFTGSQGDVGATGVTGFTGSVGAVGATGVTGFTGSQGIQGIQGVVGYTGSLGDTGATGVTGYTGSFGLTGATGVTGFTGSIGAVGATGATGVTGYTGSSGATGATGAIGYTGSQGIEGVSNSIFNYLAQTTATSGQPTTGHLLWNTTTQTAATSINIFHITNGPSPDDIDLFLSLLTAGSTFTIQSRTVSGDYQRWSITGTPSNVNPSTANSYWIIPVVLVSSSGAGTTNFANDAALILALTTASTGYTGSQGASGSGGVIANYGSFLDLQNQPAAVINTAYPVYLRTPDIALNVSIVNNSEITIAYAGTYNIQFSLQLVKPNASAAFAFIWLRKNGVNVPDSAGKVAVAGSAGSTIAAWNYVVDAAAGAYYQIMWSTDDTDVRLAYNTSAAPAPEIPSAIVTVTQVTYTQIGYTGSQGVTGYTGSSGATGATGVTGYTGSSGATGATGVTGFTGSQGIQGIQGVVGFTGSQGIQGIQGVVGFTGSMGDTGATGITGYTGSQGIQGIQGVVGYTGSQGIQGIQGVVGFTGSIGDVGATGVTGATGATGVTGATGVTGATGPIGYTGSGGAAGAVGATGPTGATGIGATGATGPIGYTGSAGTGGGGSAGLQDIFLLGGM
Physico‐chemical
properties
protein length:823 AA
molecular weight: 78080,32380 Da
isoelectric point:4,06697
aromaticity:0,06683
hydropathy:0,20875

Domains

Domains [InterPro]
IPR050149
61–398
IPR050149 IPR008160
IPR008160
61–119
IPR008160 IPR008160
CAB4154505.1
1 823
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4154505.1 [NCBI]
Genbank nucleotide accession
LR796620 [NCBI]
CDS location
range 2541 -> 5012
strand +
CDS
ATGAGCACACCTAGAGTCGTAGTTGATGATACATTACCAGTTGAACGAATTGTTGTAACTGGCAATGTGCAGACTGATCCAACCAGTCGCATTGTGGTTTCGAGTGAAGATTTGCCCGGAGTCACAGTCACCAACACAGGTGATGACATCACTGTCACTATTGGTGCCAACACTGCAATTGGCCCGCAAGGTGCAACAGGAGCAACTGGCGCAACTGGCCCTATAGGTGCTACAGGATACACAGGATCACGAGGAGATACAGGTGCAACAGGATCAACAGGGGCTACAGGCCCAATCGGCGCAACAGGAGATACAGGTGCAACAGGTATTACTGGAGCAACAGGTGCAACTGGGGCTATTGGCGCTTCTGGTGCATTGGGATATACTGGAAGCATTGGCAACACCGGAGCGTCCGGTGCAACAGGTGCTTCAGGATTACTTGGATATACTGGATCGCAAGGAGCTATTGGTGCTACAGGCAGCACAGGATATACTGGAAGTATAGGCGCAACCGGCGCAACTGGGCCTATAGGTGCTACTGGTGCTACAGGCATAACAGGATATACAGGAAGTCAAGGCATTCAAGGTATCCAAGGCATACAAGGCGTTATTGGATTTACTGGTAGTCAAGGTGACGTGGGTGCTACAGGCGTAACTGGCTTTACAGGATCAGTTGGAGCCGTGGGGGCTACTGGCGTTACGGGATTTACTGGTAGTCAAGGTATACAAGGCATTCAAGGTGTTGTGGGATATACCGGAAGCCTAGGTGACACAGGTGCTACAGGTGTTACTGGATACACAGGAAGTTTTGGCCTTACAGGTGCTACTGGCGTGACTGGCTTTACAGGATCAATAGGTGCTGTGGGAGCAACAGGCGCAACAGGCGTTACAGGTTATACTGGAAGTTCGGGCGCTACAGGTGCAACCGGGGCTATAGGCTACACAGGTAGTCAAGGCATAGAAGGTGTCAGCAACAGTATCTTCAATTACCTAGCTCAAACAACAGCCACTAGTGGTCAGCCCACTACAGGACACCTGCTTTGGAATACTACAACTCAAACTGCTGCCACCAGCATCAACATATTTCACATTACTAATGGTCCAAGCCCAGACGATATCGATCTGTTCCTGAGCCTGTTGACAGCTGGATCAACGTTCACAATTCAAAGCAGAACAGTAAGTGGTGATTACCAACGTTGGAGCATTACTGGAACACCCAGCAACGTCAATCCCAGCACTGCTAATAGCTATTGGATCATACCAGTAGTATTGGTTTCAAGTAGCGGAGCAGGCACAACCAACTTTGCTAATGATGCTGCCTTGATTTTGGCTCTAACCACGGCCAGCACAGGTTACACCGGTAGCCAAGGTGCAAGTGGTTCGGGCGGTGTCATTGCCAACTACGGCAGCTTCCTGGATCTGCAGAATCAACCTGCTGCGGTGATCAACACAGCTTATCCAGTTTACTTGCGCACACCTGACATTGCACTGAATGTGTCAATTGTTAACAACAGTGAAATTACAATTGCCTATGCTGGCACATACAATATTCAATTCAGCTTGCAGTTGGTCAAGCCCAATGCTAGTGCTGCATTTGCGTTCATATGGTTACGCAAGAATGGTGTCAACGTGCCGGACTCAGCTGGTAAGGTTGCTGTTGCAGGTTCAGCAGGATCAACTATTGCTGCATGGAACTATGTGGTCGATGCCGCGGCAGGTGCTTATTATCAAATCATGTGGAGCACTGATGATACCGATGTTAGACTTGCTTACAATACTTCAGCAGCACCAGCACCAGAAATCCCCAGTGCCATTGTCACAGTAACTCAAGTCACATACACACAAATTGGTTACACTGGTAGTCAAGGTGTTACAGGTTACACAGGAAGTTCGGGAGCAACTGGCGCTACTGGTGTTACAGGTTATACTGGAAGTTCGGGCGCAACAGGTGCTACTGGTGTAACAGGATTTACTGGTAGTCAAGGCATTCAAGGTATCCAAGGCGTGGTTGGCTTTACTGGTAGTCAAGGTATACAAGGCATTCAAGGTGTTGTTGGTTTTACTGGCAGCATGGGTGACACAGGTGCAACTGGTATTACAGGTTACACAGGTAGTCAAGGAATCCAAGGCATTCAAGGTGTTGTTGGCTACACTGGTAGTCAAGGCATTCAAGGTATCCAGGGCGTTGTTGGTTTTACTGGATCAATTGGTGACGTGGGTGCTACAGGCGTTACAGGAGCAACAGGCGCAACAGGCGTTACAGGCGCAACAGGCGTTACAGGTGCAACAGGCCCAATTGGTTATACTGGCAGTGGCGGTGCAGCAGGTGCTGTGGGCGCAACCGGACCAACTGGTGCAACTGGTATAGGTGCAACAGGTGCAACAGGCCCAATTGGCTACACAGGAAGTGCTGGCACCGGTGGCGGAGGCAGCGCAGGACTGCAAGATATTTTCTTATTAGGAGGCATGTAA

Tertiary structure

PDB ID
c26201c555ffe766e0eeb47be33ef5fd14134e1cc98d2f190dd517409262fe1f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2506
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50