Protein

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Genbank accession
UYD59700.1 [GenBank]
Protein name
baseplate wedge protein
RBP type
TSP
Evidence DepoScope
Probability 0,56
Protein sequence
MELIKIGQVVDDGQGDYLRRGGQKVNDNFTELFTQLGDGDRPFAAGAWKNHTTGVLKPKFGESWAVNTSSGAISVNLPKGSVTDYNKAIKLRDVWSTWANQNVTLYAATGDTLKGSPLPRRLDKNLMDIELVYCAPGRWEYVENKRVDRITTSDLSTVAKREILVETDGQTDFPDVFGSSNYNIGNIEVYLRGNLLYYGSELSSNSNYGSIDPASPTGIIPLDGRSIRIRGIEILAGDTITFVTYMDGIASYRSSYNTRSVQVFSTADSAKTSVAGEIWVGDIATKNSFSIEEIGIEMNNRINPNSLEVLINGILMSRAGDGDLPMFVCEGAVGENQADCQANGGNWVPSAIDYAMVLDDSGNVSQINFGNPFESGDMVTFRWFNNDIGTLLDWDGINGIKEKADQVYLNAEQQVTIQNSIEYTDFDNPSQKTAEVVPGVFTGRLDTIQMFFDSIYPIGTIYENANNPANPRDYMGLGVWKRYAEGKIVAGWTSNQADIEFSMNNNDLDSGGNPSHTAGGTYGAKSVELAPLNIPEISSTDKVLVSHPDGNIIIGGCLIDPDASGPGYTKYIESVLAVNKGNLSPANISILPPIITAYKWVRVG
Physico‐chemical
properties
protein length:604 AA
molecular weight: 65719,48380 Da
isoelectric point:4,53970
aromaticity:0,09106
hydropathy:-0,27864

Domains

Domains [InterPro]
IPR034695
1–604
IPR034695
IPR036240
2–230
IPR036240 IPR054430 IPR053827
IPR008987
3–146
IPR008987
G3DSA:1.20.5.960
13–45
G3DSA:1.20.5.960
UYD59700.1
1 604
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM5
[NCBI] 		3101603 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD59700.1 [NCBI]
Genbank nucleotide accession
OP380602 [NCBI]
CDS location
range 108059 -> 109873
strand +
CDS
ATGGAACTAATCAAAATTGGACAAGTTGTCGATGACGGCCAAGGCGATTATCTGCGCCGTGGCGGTCAAAAGGTTAATGACAACTTTACCGAGTTATTCACACAATTGGGCGACGGTGATCGCCCATTCGCTGCAGGTGCCTGGAAAAACCATACAACTGGTGTCCTTAAACCGAAATTTGGCGAGTCATGGGCAGTCAACACATCATCTGGCGCTATTTCCGTAAACTTGCCTAAGGGATCGGTGACCGATTACAATAAAGCAATTAAACTGCGCGACGTTTGGTCCACGTGGGCTAACCAAAACGTGACATTATACGCTGCTACTGGCGACACTCTTAAAGGTTCTCCGCTTCCTCGTCGTTTAGACAAAAACTTAATGGACATTGAGTTAGTTTATTGCGCTCCTGGAAGATGGGAATACGTTGAAAATAAGCGGGTTGACCGAATCACGACATCTGACCTCAGCACCGTAGCCAAACGTGAAATATTGGTCGAAACTGATGGCCAGACTGATTTCCCAGATGTTTTTGGTTCATCGAATTACAACATCGGAAACATCGAAGTTTATCTCCGTGGTAACCTTCTGTATTATGGAAGCGAGTTGTCTTCAAACTCAAACTACGGTTCTATCGACCCGGCAAGCCCGACTGGCATTATTCCGTTGGATGGCCGAAGTATTCGCATACGCGGTATCGAAATACTTGCAGGCGATACCATCACATTCGTGACATATATGGACGGTATCGCGTCATACCGTAGCTCGTACAATACACGAAGCGTTCAGGTATTTTCAACTGCTGATAGCGCTAAAACATCAGTTGCTGGTGAGATTTGGGTCGGTGATATCGCAACAAAGAACAGTTTCAGTATCGAAGAAATTGGTATTGAAATGAACAATCGTATAAACCCAAACTCACTTGAAGTCCTCATTAATGGCATATTGATGTCACGGGCAGGCGATGGTGATTTGCCTATGTTCGTTTGTGAAGGCGCGGTTGGTGAAAACCAAGCAGACTGTCAGGCAAACGGCGGGAACTGGGTGCCGTCAGCAATTGACTATGCTATGGTCCTTGATGATAGTGGAAACGTTTCACAAATCAACTTTGGAAATCCTTTCGAATCAGGAGATATGGTAACATTCCGCTGGTTCAACAATGATATCGGAACATTGCTTGATTGGGATGGGATTAACGGGATAAAGGAAAAAGCTGACCAGGTTTACCTGAATGCTGAGCAGCAAGTCACTATTCAGAACAGCATCGAGTACACTGACTTTGACAATCCGAGCCAGAAAACTGCTGAGGTAGTTCCAGGGGTTTTCACTGGACGACTGGATACAATCCAGATGTTCTTTGACTCTATATACCCAATAGGAACTATTTACGAGAATGCCAACAACCCTGCCAACCCTCGTGACTACATGGGTTTAGGTGTATGGAAAAGATACGCTGAAGGCAAAATTGTGGCTGGTTGGACGTCAAACCAAGCTGATATTGAATTCAGCATGAACAACAACGATCTGGATAGCGGCGGTAACCCGAGTCATACGGCTGGCGGAACATACGGTGCAAAATCTGTTGAACTGGCTCCGTTGAATATCCCTGAGATATCGTCAACCGACAAAGTTCTTGTTAGCCACCCAGATGGAAACATAATCATCGGCGGATGTTTGATTGACCCGGACGCGAGCGGCCCTGGATACACAAAATATATAGAATCTGTTTTAGCAGTTAATAAAGGCAACTTGTCACCTGCTAACATAAGCATTCTTCCACCGATCATCACCGCATATAAATGGGTAAGGGTAGGATAA

Tertiary structure

PDB ID
43bd9b513dc68ef879a2f9b4826757f94917a1e627407b12c8cd2259d7a1df4e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6504
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank