Protein

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Genbank accession
AOZ62330.1 [GenBank]
Protein name
pectin lyase domain containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MIYVKDFSGITEAVKIQNAINAAALPTSSSKTVMLEEKDYYLESSLTLLNDVELLFGYRSRLVIGGNFPVLLIGRNASVTNPFIAIDAPTFDSPVFYLDGKNKYYNTWNKTAIKDGIVLNWTGSHKGVGIRFYSGGTDHEISFVDTSNIKLVGLRKGIELEAKAPATGMAWVNANRFNNISIEDCVEMITLDSSETIPNECSGNIFSGLQLQPSTATTKVLKVSGQHNRFDGMLWDISLIPTSKFVDITANSSFTKIDFNRSLPSTKVQDNGASTILL
Physico‐chemical
properties
protein length:278 AA
molecular weight: 30483,29470 Da
isoelectric point:5,67790
aromaticity:0,09353
hydropathy:-0,04676

Domains

Domains [InterPro]
IPR011050
15–204
IPR011050
AOZ62330.1
1 278
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SBP8a
[NCBI] 		1909401 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOZ62330.1 [NCBI]
Genbank nucleotide accession
KX961632 [NCBI]
CDS location
range 33021 -> 33857
strand +
CDS
ATGATATATGTGAAGGATTTTAGTGGGATTACCGAGGCTGTCAAGATACAGAACGCTATCAATGCAGCAGCTTTACCAACTTCTTCATCAAAGACCGTAATGCTAGAAGAGAAAGATTATTACCTAGAGTCATCTCTTACTTTGTTAAATGATGTAGAGTTATTGTTTGGCTATCGTTCAAGATTAGTTATTGGTGGTAATTTCCCAGTCCTATTAATAGGACGTAATGCTTCTGTTACAAATCCATTCATAGCTATCGATGCTCCAACTTTCGATTCACCTGTCTTTTATCTAGATGGTAAAAATAAATATTACAATACATGGAATAAGACAGCGATAAAGGATGGCATAGTTCTCAACTGGACAGGTTCCCATAAAGGTGTGGGTATCCGATTCTATTCCGGAGGTACTGACCATGAGATTTCATTTGTAGATACATCTAATATCAAACTAGTAGGTCTACGAAAAGGTATCGAGCTAGAAGCTAAGGCTCCGGCTACGGGGATGGCATGGGTGAACGCTAACCGATTCAATAACATCTCCATAGAAGACTGTGTAGAAATGATTACGCTTGACAGCAGCGAAACAATACCGAACGAATGTAGTGGTAATATCTTCTCAGGTTTGCAGTTACAACCATCAACGGCAACTACAAAAGTCTTAAAGGTAAGTGGACAGCATAACCGATTCGATGGTATGCTCTGGGATATATCTTTAATACCTACATCTAAGTTTGTAGATATTACAGCTAACAGCTCCTTCACAAAGATAGACTTTAATCGTTCGTTACCTAGTACGAAAGTACAAGATAATGGAGCAAGCACAATTTTACTGTAG

Tertiary structure

PDB ID
926a8cb73bd28cdd678ee0f18fffc3204c7bb9ed1d93ddc94a246d753f55e9a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9256
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Predicting Genome Terminus Sequences of Bacillus cereus-group Bacteriophage using Next Generation Sequencing data Chung,C.-H., Walter,M.H., Yang,L., Chen,S.-C., Winston,V. and Thomas,M.A. — — GenBank