Protein

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Genbank accession
QZI94026.1 [GenBank]
Protein name
baseplate central spike complex protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQRPGFPNVSIKLYQDYEAFLENRFVELGATFITMTLRDSLRGVNEGLLQIYDSKALHTKLAGTEIIQISLSTANTEQVFNRIYGIAHSNVTVDSKSDNIITFQLKSYHETLNLKFSRATDTNAVNNITSMIDAIYKNVPLWKPTITGVNVFIPKCPWVSTVNDYFEYVRTHGQSVDNESFVYCWEDFDGIKITDHKLLMQGDPIPAIVTEPTLTGQFMDMSEYLMVFNFEWDTKSNAVTKNSFANVTYTTIDFITKQYNKIVVGNGDNIAHFAHGGAYGNLTYKNAYLEGSKLATFGQFDSYASAVCHGNFSLRPAQKLRFFDAKQQIRTDFIVDEVVHEICREQSLTHIHMFSHSEILKDVQFEGKI
Physico‐chemical
properties
protein length:369 AA
molecular weight: 41974,97070 Da
isoelectric point:5,73314
aromaticity:0,12195
hydropathy:-0,21247

Domains

Domains [InterPro]
IPR043504
1–111
IPR043504 IPR043085 IPR015180
SSF69279
1–196
SSF69279 SSF69279
IPR015181
2–195
IPR015181 IPR043083
IPR043084
245–364
IPR043084
QZI94026.1
1 369
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage Whisky
[NCBI] 		2863840 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI94026.1 [NCBI]
Genbank nucleotide accession
MZ504878 [NCBI]
CDS location
range 108995 -> 110104
strand +
CDS
ATGCAAAGACCCGGATTTCCTAACGTCTCTATAAAGCTATATCAAGATTATGAAGCATTTTTGGAAAATAGATTTGTTGAATTGGGTGCTACCTTCATTACAATGACATTACGTGATTCTCTTCGTGGTGTCAATGAAGGTCTACTACAGATCTATGATTCTAAGGCGCTTCATACGAAATTAGCAGGAACAGAGATTATACAAATTTCATTATCAACGGCTAATACTGAACAAGTATTCAACCGGATATATGGTATCGCTCATAGTAATGTGACCGTTGACTCTAAGTCCGATAATATAATAACCTTCCAATTGAAAAGTTATCATGAAACTCTTAATCTAAAGTTTTCTCGCGCTACCGACACTAACGCAGTGAATAACATCACCAGTATGATAGACGCGATCTATAAAAATGTTCCCTTGTGGAAACCTACCATTACGGGAGTAAACGTATTCATTCCTAAGTGTCCGTGGGTGAGTACCGTTAATGACTATTTTGAATATGTGAGAACACATGGTCAGAGTGTAGACAACGAATCGTTCGTTTACTGTTGGGAAGACTTTGACGGGATCAAGATCACCGATCATAAACTACTAATGCAAGGTGATCCAATCCCTGCTATCGTCACCGAGCCTACCCTAACAGGGCAATTCATGGATATGAGCGAATATTTGATGGTGTTTAACTTTGAGTGGGATACTAAGAGTAATGCGGTAACAAAAAACTCATTCGCTAATGTCACTTACACCACAATTGATTTCATCACGAAGCAGTATAACAAGATTGTAGTGGGTAATGGTGATAACATAGCTCATTTTGCTCATGGTGGCGCTTATGGTAATTTGACATATAAAAACGCGTATCTTGAAGGTTCTAAACTGGCAACTTTTGGACAATTTGATTCCTATGCCAGCGCGGTGTGTCATGGTAATTTCTCTCTACGTCCAGCGCAAAAGCTAAGATTCTTTGATGCTAAACAGCAAATTCGCACCGACTTTATTGTCGATGAGGTTGTTCATGAAATTTGTCGAGAACAATCGTTAACACATATTCACATGTTTAGTCATAGTGAGATTTTGAAAGATGTACAATTTGAAGGTAAAATATGA

Tertiary structure

PDB ID
9945dd1d91a79ba7caa28c5d41fd2b975ef990f85de8e8f9a407f45f9c1d5a05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and sequencing of three RB49-like bacteriophages infecting O antigen-producing E. coli strains Efimov,A., Kulikov,E., Golomidova,A., Belalov,I., Babenko,V. and Letarov,A. 2021 — GenBank