Protein

View in Explore
Genbank accession
YP_009835949.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDSQIFLDTTLFLTLESLTFSAPPPDVVDGATYVVAANPTGAWAGHEGDVAVYVEKVWTFYTPRYGWRARVRSYEKFLWFNGTTWIDEATGEDPVNPDPDPSVKPKWYDIGVTVSDSMYANEPVVHLPILDPMYLPANMVGSQFDMADGASPAYYQFRVQRNGQNVATMTVEIGNFNASFTTSGGNPISFAAGDRMTVRAQQEAVAGMKNFGFVIRMGLV
Physico‐chemical
properties
protein length:221 AA
molecular weight: 24350,07740 Da
isoelectric point:4,51673
aromaticity:0,13122
hydropathy:-0,13348

Domains

Domains [InterPro]
IPR021251
7–86
IPR021251
YP_009835949.1
1 221
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage KFS-SE1
[NCBI] 		2048975 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009835949.1 [NCBI]
Genbank nucleotide accession
NC_048683.1 [NCBI]
CDS location
range 32246 -> 32911
strand +
CDS
ATGTCCGACTCGCAAATCTTCCTCGACACCACGCTATTCCTGACACTGGAATCGCTGACCTTCTCCGCTCCGCCGCCGGACGTGGTGGACGGGGCCACCTACGTCGTCGCGGCTAACCCGACGGGGGCGTGGGCCGGACATGAAGGCGATGTGGCCGTGTACGTGGAAAAGGTCTGGACGTTTTACACGCCTCGCTACGGATGGCGCGCTCGCGTTCGTTCGTACGAGAAATTCTTGTGGTTCAATGGCACGACGTGGATTGACGAGGCGACCGGGGAAGACCCGGTCAACCCTGACCCTGACCCAAGCGTTAAGCCGAAATGGTACGACATCGGGGTGACGGTGTCTGACAGCATGTACGCGAATGAACCTGTCGTGCATCTGCCGATCCTTGACCCGATGTACCTGCCCGCCAACATGGTAGGATCTCAGTTTGACATGGCCGACGGTGCAAGCCCGGCCTATTATCAATTTCGCGTGCAGCGCAACGGCCAGAACGTCGCAACGATGACCGTGGAAATCGGAAACTTCAACGCGTCGTTTACCACATCCGGTGGCAACCCGATTTCCTTCGCGGCCGGGGATCGCATGACGGTTCGCGCGCAGCAGGAAGCCGTCGCCGGGATGAAAAACTTTGGCTTCGTAATTCGCATGGGACTGGTCTAA

Tertiary structure

PDB ID
da8e25f0fd8e0ec82f04e6e83b028d20565d5f49e0654d53ce8b7d88d0570d08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella phage KFS-SE1 Lee,J.-H., Park,M.-K., Choi,I.Y. and Kim,H.-J. 2011-12-15 — GenBank