Protein

View in Explore
Genbank accession
ARM68861.1 [GenBank]
Protein name
immunity-specific protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MDPTIKLIAAAQEMSMTIPRRQACMVYGKLNVTLKKGDTQQEQDKRLTNGYIHIPDDMPTGSFDFGFTREDADINIETQQSTYELALDTAARRITGQVLFEQDVTAPGFGDWRPMIDFSCGDVVGVRVWGKELPLPVTSITRETSQWRVHVGGQLINDRRKVVSENRKILADIESERRERSAEITRVSEIAEKATSAAEAADEKAGEAQETAQDALSKWQQQKDELDALQTRQIKELEAQNAAVRRLGDIQEPLAGSISDYDALTLGPVKITYPARNKIDFELLSGHEFVSGASVLVNARVNAISQYTHSFPIRLTTSRPKASGTVGWAENYSSASILVIPTADFSAILSEERRKRGLY
Physico‐chemical
properties
protein length:359 AA
molecular weight: 39891,35580 Da
isoelectric point:5,30441
aromaticity:0,06407
hydropathy:-0,45487

Domains

Domains [InterPro]
Coil
191–229
Coil
ARM68861.1
1 359
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage LGCM-V8
[NCBI] 		1972439 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM68861.1 [NCBI]
Genbank nucleotide accession
KY624615 [NCBI]
CDS location
range 29143 -> 30222
strand +
CDS
ATGGACCCAACAATAAAACTCATCGCTGCAGCACAAGAAATGTCCATGACCATCCCCAGACGACAAGCCTGCATGGTCTACGGAAAACTCAACGTTACGCTCAAAAAAGGAGACACCCAACAAGAACAAGACAAACGCCTCACCAACGGCTATATCCACATCCCAGACGACATGCCCACCGGATCATTCGATTTCGGATTCACCCGTGAAGACGCCGACATCAACATCGAAACACAACAATCAACCTACGAACTAGCCCTCGATACCGCAGCACGCAGAATCACAGGACAAGTCCTCTTCGAACAAGACGTCACCGCGCCGGGCTTTGGTGATTGGCGTCCCATGATTGATTTTTCATGCGGTGACGTTGTCGGGGTGCGTGTGTGGGGCAAAGAGCTACCGCTGCCGGTCACCTCAATTACGCGTGAAACTAGTCAGTGGCGTGTCCATGTGGGCGGGCAATTGATTAATGATCGCCGCAAAGTTGTTTCTGAGAATCGGAAGATATTGGCCGATATTGAGTCCGAACGCCGCGAGAGATCTGCTGAGATTACGCGAGTCTCTGAGATTGCAGAAAAAGCAACGTCAGCAGCTGAGGCAGCAGACGAAAAAGCTGGGGAGGCTCAGGAGACTGCTCAGGATGCGCTGTCGAAGTGGCAGCAGCAAAAAGATGAGCTTGATGCTCTCCAAACCCGGCAGATTAAAGAACTAGAGGCGCAGAACGCAGCGGTACGTAGACTCGGGGACATTCAGGAACCGCTTGCTGGGTCGATCAGTGACTATGACGCTTTGACATTAGGACCGGTGAAGATTACCTATCCTGCCCGGAACAAAATTGATTTTGAACTCCTATCAGGCCACGAGTTTGTTTCTGGCGCATCGGTGTTGGTTAACGCTCGCGTGAATGCGATTTCTCAGTACACGCACAGCTTCCCGATCAGATTAACGACTTCCCGCCCGAAAGCATCTGGAACGGTTGGATGGGCAGAAAACTATTCTTCAGCATCAATTCTGGTGATTCCCACCGCCGATTTCTCAGCAATTTTGTCCGAAGAACGCAGAAAGAGAGGACTATATTAA

Tertiary structure

PDB ID
4bcd324ef53b19046f655688a0b5dab49265643843b860d3e25bfa1dde65ee85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7084
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Corynebacterium pseudotuberculosis strain 39 phage sequence LGCM-V8 in tRNA gene Viana,M.V.C., Figueiredo,H., Ramos,R., Guimaraes,L.C., Pereira,F.L., Dorella,F.A., Barh,D., Selim,S.A.K., Salaheldean,M., Silva,A., Wattam,A.R. and Azevedo,V. 2015-08-27 — GenBank