Protein

View in Explore
Genbank accession
QQO92806.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TSP
Evidence RBPdetect2
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MEDSILIIVPQKTYIPGKGMGPINKPYYVDRNTLDYYDLMNIQYVKVNKNEYVDLNSDGKYDISDYFSIEDFIKQKYLQINEAFKQIKIISKDVDSINKDTEEKLNSFKEKTINEEEINEYLSNLDKIKYDLEDKKIEIQENKENIENTFNEVKEELNQIESFLNDFEKVKDKFQNDYNNTMSLSEEMESLSSSVNMIASLKEEIKNIDDIINNFKNELNNQYNKTYKDIENIKNDYIEEIDSVIKESLKESFSKKEFKSTNHNITSSGENRPLITFIDDDGRNELKTKWEPILKEKKNKLTIATVTKWIDDKEPTVLQWDEIHDWNQKYGVEFVSHTHEHKHAQQLTDEEVEDELRLSRDILKREGLTYNIIVQPFGENTDSVRRISRKYYRANIGTKEGINTPPLDTFRINRITLGEPLYTTFEQYKEKIDEAIINKGWIIFKSHSQYESFDENQLNIIRQIIDYAREQEMIEVNLEEGLDYIGNLIDTGDYTRRSQNIDYYVMDRDGKVYSNFGEKNYYTLKYNTVSIDTPVTEFTDRTTSTVAIVSSNSQGFPNNSSGQLQTVKSESMGLSYQLFMPNNSNSIYKRRWNTTTNNWTEFEDIKSSSNSNTLIQKIESVDVVVPANNYKDVNFTIQGVTNSDNVIVSPGSGIEVGLVYNGFITTTDTVRLRLWNNTSDPITTKRPYKITVVKNDTSQNIIKGLKGDTGQIGPQGLQGLPGLDGNYAPTLPITVRKPKDFNYGNEILKDRIVTDGKGTFGVKYDITTNRLSGGTTYYLDAVNGNDSNDGLSKEKPFKSFKVAIPKVNDNDTIMVADGNYFRIGGTLITKAFNKSINIIGTGNNVNIVMADEPSWTLTSGKNRTYEFSRSATDKVVTLDNSIDIKKVNSIDEVESTPNSWFTDGTKVYSNINDNKPSNSNVIPLISSSNIQLTSLASNIYFENLNIYGGRNCVELNLTSNNSAFFKKCNFYHSASSYNGLAIVGGKNIILDSCKGNYNSFDGLNYHIGADGSKPNIIEINCIGMDNGTDKGLNGVKSNNGSTTHEGLKIIRINGIYGRNDGGNVADVNEGTQSWNLGCIAFESYQGKDFQASSGGNLFLDECIAYGSENSINIGDTDSKVYTRGGRYQNKLIVSTEIKY
Physico‐chemical
properties
protein length:1139 AA
molecular weight: 129243,08620 Da
isoelectric point:5,00504
aromaticity:0,09570
hydropathy:-0,67226

Domains

Domains [InterPro]
Coil
125–173
Coil G3DSA:3.20.20.370 IPR011050
Coil
198–247
Coil IPR051398
IPR011330
271–484
IPR011330
cd10918
274–420
cd10918
IPR002509
275–390
IPR002509
QQO92806.1
1 1139
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Madawaska
[NCBI] 		2797424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO92806.1 [NCBI]
Genbank nucleotide accession
MW349129.1 [NCBI]
CDS location
range 145678 -> 149097
strand -
CDS
ATGGAAGATAGTATACTAATTATAGTTCCTCAAAAAACTTATATTCCGGGTAAAGGTATGGGACCTATAAATAAACCTTATTATGTTGATAGAAATACATTAGATTATTATGATTTAATGAATATTCAATATGTAAAGGTAAATAAAAATGAATATGTTGATTTAAATTCAGATGGGAAATATGATATATCTGATTACTTCTCTATTGAAGATTTTATAAAACAAAAATATCTTCAAATTAATGAAGCTTTTAAACAGATAAAAATAATTTCTAAAGATGTTGACAGTATTAATAAAGACACAGAAGAAAAACTTAATTCATTTAAAGAAAAAACAATAAATGAAGAAGAAATAAATGAATATTTAAGCAATCTAGATAAAATTAAATATGATTTAGAAGATAAAAAGATAGAAATTCAAGAAAATAAAGAAAATATTGAAAATACATTTAATGAAGTTAAAGAAGAATTGAATCAAATTGAATCATTTTTAAATGATTTTGAGAAAGTAAAAGATAAATTTCAAAATGATTATAATAATACTATGAGTTTATCTGAAGAAATGGAAAGTTTAAGTTCCAGTGTAAATATGATTGCAAGTTTAAAAGAAGAAATAAAAAATATTGATGATATAATAAATAACTTTAAAAATGAATTGAATAATCAATATAATAAAACTTATAAAGATATTGAAAATATCAAAAATGATTATATTGAAGAAATAGACAGTGTTATAAAAGAATCATTAAAAGAAAGCTTCTCAAAAAAAGAATTTAAATCTACAAATCATAATATAACTTCTAGTGGAGAAAATAGACCTTTAATTACATTTATTGATGATGATGGTAGAAATGAATTAAAAACAAAATGGGAACCTATATTGAAAGAAAAGAAAAATAAACTTACAATAGCGACAGTTACTAAGTGGATTGATGATAAAGAACCTACAGTTCTTCAATGGGATGAAATACATGATTGGAATCAAAAATATGGCGTTGAATTTGTAAGTCATACTCATGAACATAAGCACGCTCAGCAACTTACGGATGAGGAAGTAGAAGATGAGTTAAGATTGTCTAGAGATATTTTAAAAAGAGAAGGTCTAACATACAATATTATTGTCCAACCTTTTGGTGAAAATACCGATTCTGTAAGAAGAATTTCTAGAAAATATTATAGAGCTAATATTGGAACTAAAGAAGGAATCAATACACCTCCTTTAGATACTTTTAGAATTAATCGTATCACATTAGGTGAACCACTATATACAACTTTTGAACAATATAAAGAAAAAATAGATGAAGCAATCATAAATAAAGGTTGGATAATATTTAAATCTCATTCTCAATATGAATCTTTTGATGAAAATCAATTAAATATTATTAGACAAATTATAGATTATGCTAGAGAACAAGAAATGATTGAAGTGAATTTAGAAGAAGGATTAGATTATATAGGTAATTTAATAGATACAGGAGACTATACGAGAAGAAGTCAAAATATAGATTATTATGTGATGGATAGAGATGGTAAAGTTTATTCAAACTTTGGAGAAAAGAATTACTATACTTTAAAATATAATACCGTAAGTATTGATACTCCTGTAACAGAGTTTACTGATAGAACAACTTCAACGGTTGCAATTGTATCTTCGAATTCTCAAGGTTTTCCAAACAACTCATCAGGACAGTTACAGACGGTTAAATCAGAAAGCATGGGATTAAGCTATCAATTGTTTATGCCAAATAATAGTAATAGTATCTATAAACGTAGATGGAATACAACAACAAACAATTGGACTGAATTTGAAGATATTAAAAGTTCTTCAAATTCCAATACTTTAATACAAAAAATAGAATCAGTGGATGTTGTAGTACCTGCTAATAATTATAAAGATGTTAATTTTACAATTCAAGGTGTTACAAATTCAGACAATGTTATTGTTTCTCCTGGATCTGGTATAGAAGTGGGATTAGTTTATAATGGTTTTATAACAACGACAGATACTGTTAGACTTAGATTATGGAATAATACAAGTGATCCCATAACAACAAAAAGACCATATAAGATAACAGTTGTGAAGAATGATACATCACAAAATATAATTAAAGGTCTAAAAGGTGACACAGGTCAGATTGGACCTCAAGGTTTGCAAGGTTTACCTGGCCTTGATGGAAATTATGCTCCTACTCTTCCAATAACAGTTAGAAAACCTAAAGATTTTAATTATGGAAATGAGATACTAAAAGATAGAATAGTTACTGATGGTAAGGGTACTTTTGGAGTGAAATATGATATAACTACTAATAGATTATCAGGAGGAACTACTTACTACTTAGATGCTGTTAATGGTAATGATTCCAATGACGGTTTATCTAAAGAAAAACCATTTAAATCTTTTAAAGTAGCAATACCTAAAGTCAATGATAATGATACAATTATGGTTGCTGATGGCAACTATTTTAGAATCGGTGGTACATTAATTACAAAAGCATTTAATAAGAGTATTAATATAATAGGTACAGGTAATAATGTGAATATTGTTATGGCTGATGAACCTTCATGGACACTAACTTCTGGTAAAAATAGAACTTATGAATTTAGTAGATCTGCTACCGATAAAGTTGTAACTCTAGATAATAGTATTGATATAAAGAAAGTAAATAGTATTGATGAAGTTGAAAGCACGCCTAATTCATGGTTTACTGATGGTACTAAAGTTTATTCAAATATTAATGATAATAAACCTTCAAATAGTAATGTAATACCTTTAATATCTTCTTCAAATATACAGTTAACAAGTCTAGCTTCAAATATATATTTTGAAAATTTAAATATATATGGTGGAAGAAACTGTGTTGAATTGAATTTAACTTCAAATAATAGTGCATTCTTTAAGAAATGTAATTTTTATCATTCTGCTTCAAGTTACAATGGTCTTGCTATTGTTGGTGGAAAAAATATTATTCTTGATAGTTGTAAAGGTAATTATAATAGTTTTGATGGTTTAAATTACCATATTGGTGCCGATGGTTCTAAACCTAATATAATAGAAATTAATTGTATAGGAATGGATAATGGAACTGATAAAGGATTGAATGGCGTTAAATCAAATAACGGATCAACTACTCATGAAGGTTTAAAAATCATTAGAATAAATGGTATATATGGAAGAAATGATGGAGGTAATGTAGCTGATGTAAATGAAGGTACACAATCGTGGAATTTAGGATGTATCGCATTTGAAAGTTATCAAGGAAAAGACTTCCAAGCTTCATCAGGAGGTAATTTATTCTTAGATGAATGTATAGCTTATGGATCTGAAAATAGTATTAATATAGGTGACACTGATAGTAAAGTTTACACTAGAGGTGGAAGATACCAAAATAAATTAATCGTATCTACAGAAATCAAGTATTAA

Tertiary structure

PDB ID
30c5dd08a144c2af55843165a3f343875def7328b7dbcbff5f82e39fd600ee43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Staphylococcus phage Madawaska Korn,A., Hillhouse,A. and Gill,J. 2019-07-18 — GenBank