Protein

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Genbank accession
BDA82394.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MPHLKAYDKEGNILAIGYNVTSDQGSVIIPNLKPHTKYPQGEFYVSWEGDNYESEKTVVPEFTTLESSYKEIIFYAKDILTIKPKTAYDIAVDNGFTGTEKEWVESIKGEPGEKGDTGSDYNVDFTLDANSSAPLKIHPSGNNFKLVDKVSADEMYVYQVAGNNYLRYFFKKNNGGSGYGETYELLRSQKVEPISNIVVYKEVKNPTTGTVTNLWNYTGTNSVERRVMPYKNYDKGKRYSNNGNTPIQSYQIDAGQSVSYTMQPTPSKKMNVAFYARGGYTSSEDFSVKIDGEVLQDLNIKNAPMQYTRIFEFITPPTDATYTLTIENKSAKGIYLSAINLFTLDEYKEQEVDSYVAYGQLDKTPFIDNAGANDYALKNLENNKLFGSYHGGETVESCKMEYVNNADLIKGVSLKSFSDIPVNKFYLSKNLSIRQESTLIQRANTYSVADFNTNGTLNFNFSYNVLEGATPIPLRDLWIGLTCTHSSFSKVKIPKRIDFGNTFTGETIFFPSTVGLCVQTTSDETQEIHIRHSRFKNTYVTTDHPQSVSDLEIYRKYYYAPIRSNTDKKVAPITFQFNKALDFYTI
Physico‐chemical
properties
protein length:586 AA
molecular weight: 66248,19890 Da
isoelectric point:5,68421
aromaticity:0,12799
hydropathy:-0,54113

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SsapH-Golestan-105-M
[NCBI] 		2872011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDA82394.1 [NCBI]
Genbank nucleotide accession
LC648442.1 [NCBI]
CDS location
range 112877 -> 114637
strand +
CDS
ATGCCACATTTAAAAGCTTATGATAAAGAAGGTAATATACTAGCCATAGGTTATAATGTAACAAGTGACCAAGGGTCTGTTATCATACCTAACTTAAAACCACATACAAAATACCCTCAAGGGGAATTTTACGTTTCTTGGGAAGGGGATAACTATGAGTCAGAAAAAACAGTTGTTCCTGAATTTACTACCTTAGAATCTTCTTACAAGGAAATTATATTTTATGCTAAAGATATTTTAACAATTAAACCTAAAACAGCTTATGACATAGCTGTAGATAATGGATTTACAGGAACCGAAAAAGAATGGGTTGAATCTATTAAAGGTGAACCAGGAGAGAAAGGTGATACAGGTTCCGATTATAATGTAGATTTTACTTTAGATGCTAATAGCTCTGCACCACTTAAAATACATCCATCCGGCAATAATTTTAAATTAGTTGATAAAGTTAGTGCAGATGAAATGTATGTTTATCAAGTTGCCGGTAACAATTATTTAAGATACTTCTTCAAGAAAAACAACGGTGGTTCGGGGTACGGAGAAACATATGAATTATTAAGGTCTCAAAAAGTCGAACCAATTAGTAATATTGTTGTTTATAAAGAAGTTAAAAACCCAACAACTGGTACAGTAACAAATTTATGGAATTATACTGGAACTAATTCAGTTGAAAGACGTGTAATGCCATACAAAAACTATGACAAAGGAAAAAGATATTCAAATAATGGTAATACTCCAATTCAGTCATATCAAATAGATGCAGGACAATCTGTAAGTTATACAATGCAACCTACTCCGTCTAAAAAAATGAATGTTGCTTTTTATGCTAGAGGTGGTTATACAAGCAGTGAAGATTTTTCAGTAAAAATTGACGGTGAAGTTCTTCAAGACTTAAATATAAAAAATGCACCAATGCAATATACTAGAATTTTTGAATTCATAACACCTCCGACTGATGCAACTTATACACTTACTATTGAAAATAAAAGTGCTAAGGGTATCTATCTTTCAGCAATAAATCTTTTTACACTTGATGAATATAAAGAACAAGAGGTAGATTCGTATGTGGCATACGGTCAATTAGATAAAACACCATTTATTGATAATGCAGGTGCTAATGATTATGCTTTGAAAAATTTAGAAAATAATAAATTATTCGGTTCTTACCATGGAGGGGAAACCGTTGAATCTTGCAAAATGGAATATGTTAATAATGCTGATTTAATAAAAGGTGTATCACTGAAAAGTTTTAGTGATATCCCTGTAAATAAATTTTATTTAAGTAAGAATTTATCAATTAGACAAGAAAGTACACTTATTCAAAGAGCCAATACCTATTCGGTAGCTGATTTCAACACGAACGGTACTTTGAACTTTAATTTCAGTTATAATGTTTTAGAAGGTGCAACACCAATACCTTTAAGAGATTTATGGATAGGTTTAACGTGTACACATTCATCATTTAGTAAAGTGAAAATACCAAAGAGGATAGACTTTGGAAATACTTTTACTGGTGAAACGATATTTTTCCCTTCAACCGTAGGCTTGTGTGTTCAAACTACATCTGATGAAACACAAGAAATTCATATTAGACATAGTAGATTTAAAAACACATATGTCACTACTGACCACCCACAATCAGTTTCAGATTTAGAAATATATAGAAAATATTACTATGCACCGATAAGAAGTAACACAGATAAAAAAGTAGCACCTATAACATTCCAGTTCAATAAAGCATTAGATTTTTACACTATTTAA

Tertiary structure

PDB ID
dfe49f27920a5372112aca9a2a474832bf58b8aebdc69a0d7273b31d33759533
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of phage genome Yazdi,M., Ghaemi,E.A., Shirzad-Aski,H., Mohebbi,A., Tabarraei,A., Sabzali,S. and Rafiee,M. 2013-08-01 — GenBank