Protein

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Genbank accession
AMO42817.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MARQGLLAQSKPNGAALLYSAPVDTSASAVLKIANDGTGAAYDVALRDFDQELVVDSANYLLHKGDVITGYRVNIDTAVTEGTFLPGQSFTSSSGESSMKFESFYIPDLTTIYVKSAAIRDISIESITGDFNLGDTITKGTGGDTTTAVVYSSEGGFLSIGPSTINGSGTEFTDGDDISSSSGGTATIALGGVGTAADKFIFSETTAGGTYERLLSSLFADRTYRFDVSDSSMTGLLFQLSETENGEWGPDGLAPTDPGDAGDAGTEYTTGKTTNGTAGSAGAYVQYDFSANQSLAAEIYWYEGDLTTAGNASYGGASDLFGTSSNVTYTEFYAYDLVGTWTNSVDTFIVSEITYTVTGQTSGPYGIVSDYTSTNLKVILGPGSAEFAGTNTFFDVPRDNNATRNQVTVSSVTTAKGAIDANTLVADGVANDANNVGTVTSLVIGPGQRVHVSSATQNNVFSLIGFEDASSEYTTRVFGQT
Physico‐chemical
properties
protein length:481 AA
molecular weight: 49957,57980 Da
isoelectric point:4,05003
aromaticity:0,09979
hydropathy:-0,12162

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM50
[NCBI] 		687803 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMO42817.1 [NCBI]
Genbank nucleotide accession
KU594605.1 [NCBI]
CDS location
range 22972 -> 24417
strand +
CDS
ATGGCAAGACAAGGACTTTTAGCACAATCTAAACCAAATGGGGCAGCACTACTGTACTCTGCTCCCGTCGATACCTCTGCATCAGCAGTCCTCAAGATTGCAAATGATGGAACTGGTGCTGCATATGATGTAGCGTTACGAGACTTTGACCAAGAATTAGTAGTTGACTCTGCTAACTATCTTCTTCATAAAGGTGATGTAATTACTGGATACAGAGTTAATATTGATACTGCTGTCACCGAAGGAACATTTCTTCCTGGACAATCTTTCACTAGTAGTAGTGGTGAAAGTTCAATGAAATTTGAATCATTTTATATTCCAGATTTAACTACCATTTATGTAAAATCTGCTGCCATTAGAGATATTTCTATTGAATCTATCACTGGCGATTTTAACCTAGGCGATACTATTACGAAAGGAACTGGAGGAGATACAACTACTGCCGTTGTTTATTCTTCAGAAGGTGGATTCCTTTCCATCGGACCATCTACAATTAATGGTTCTGGTACTGAATTTACTGACGGTGATGACATTTCATCTTCATCTGGTGGTACTGCAACAATCGCTCTTGGTGGAGTAGGTACTGCAGCGGACAAGTTTATTTTTTCCGAAACAACCGCTGGCGGAACATACGAAAGACTTTTAAGTTCTTTATTTGCTGACAGAACTTATCGTTTTGATGTTTCTGACTCCTCGATGACAGGATTACTATTCCAGTTGTCTGAAACTGAAAACGGTGAATGGGGTCCAGATGGATTGGCACCTACTGACCCAGGTGATGCTGGTGATGCTGGAACTGAATATACTACTGGTAAAACTACCAACGGTACAGCAGGAAGTGCTGGTGCATATGTTCAATATGATTTCTCTGCTAATCAGTCACTTGCAGCAGAAATTTATTGGTATGAAGGAGACTTAACTACTGCTGGAAATGCTAGTTATGGTGGCGCTAGCGACCTCTTCGGAACATCCTCTAATGTTACTTATACTGAATTTTATGCATATGATTTAGTAGGAACTTGGACTAATAGTGTAGATACATTTATTGTAAGTGAAATTACATATACTGTAACTGGTCAAACTTCTGGACCTTATGGTATAGTTTCTGATTACACTTCTACAAACCTTAAGGTAATTCTTGGACCTGGTTCTGCAGAATTTGCTGGCACTAATACTTTCTTTGACGTACCTAGAGATAATAATGCAACTAGGAATCAAGTAACTGTTAGCAGTGTAACTACTGCTAAGGGTGCTATTGATGCTAATACTCTTGTTGCAGACGGAGTTGCAAACGACGCAAATAATGTCGGTACAGTCACTTCTTTAGTTATTGGTCCTGGACAAAGAGTTCATGTTAGTTCCGCTACTCAAAATAATGTATTCAGTCTAATTGGATTTGAGGATGCTAGTTCTGAGTATACGACCAGGGTATTTGGTCAAACCTAA

Tertiary structure

PDB ID
a3870503b153b0624cb97bf0bbd5133b1f7a7d65fcf6f3a36dcb6b76f1cba6e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4598
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomic content and context of auxiliary metabolic genes in marine cyanophages Marston,M.F., Martiny,J.B.H. and Crummett,L.T. 2016-12 — GenBank