Protein

View in Explore
Genbank accession
QLF80618.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTITQFPTGNTQYRIEFDYLSRTFVVVTLVNSSNPTLNRVLEVGRDYRFLNPTMIEMLADQSGFDIVRIHRQTGTDLVVDFRNGSVLTASDLTNAELQAIHIAEEGRDQTVDLAKEYADAAGTSAGNAKDSEDEARRIAEDIKASGRIGYITRRSFEKGFNVITWNEVLLWEEDGEYYRWDGTLPKNVPAGSTPETSGGIGVGAWVLVGDASLRSALASEAGASMVSRNGSPLGRIIRASLFEYLTESDQQALLTTSGAVVAADYALKAAIAAGVMVLDIPRNMGIIELGRDPATLPLGFSLIGWGCRRPYTVSDDSSFLNCGVVIRVAAGASFPFYSTGRHVFRDIVFDGRDKTTYLFYSTDRYTEFNGTRLEGCGIYRFAIGIGWNIGGVSRYIATVKAHFCSISGNGDGVKNLIDSMMIGCTINANDRGVALVGGANSNFFGGCRNEWNAGDNWYAYESIENQISGELCDRAGRGGVVAGKDSSWIVTGVVVARSGANQPMNDNYSANFVIIDNGKIVISGVRTRNGANEWGQGGTNSPSFNVSVLGSGNGTLLVSGSDMTGFVTSAINQKAPTLNKAITGNLGMDDDVNVGMSQVIKGRRIIGSQSSGRLQDAVGATLSFTKPNIAQDLYGTYVTRAILIECRIGNTAQGDYIKIPIGVRHENNFYLDIITSGIVASSGRIGLSGTGVTVSLSIDSATGAISVVLTSVDGLVRDVNVSLLPSM
Physico‐chemical
properties
protein length:728 AA
molecular weight: 77736,35400 Da
isoelectric point:5,17885
aromaticity:0,08104
hydropathy:-0,03571

Domains

Domains [InterPro]
IPR005604
10–113
IPR005604 G3DSA:2.10.10.80
IPR040775
153–211
IPR040775
QLF80618.1
1 728
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_SP7
[NCBI] 		2750854 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF80618.1 [NCBI]
Genbank nucleotide accession
MT682707 [NCBI]
CDS location
range 32083 -> 34269
strand +
CDS
ATGTCCACGATTACACAATTCCCCACAGGAAACACTCAGTACAGGATTGAGTTCGACTACCTATCCAGAACGTTTGTTGTTGTTACGCTGGTGAATAGCTCTAACCCTACCCTGAACCGTGTACTGGAAGTTGGTCGAGATTACCGATTCCTTAATCCAACGATGATTGAGATGTTGGCTGACCAATCAGGTTTCGACATCGTTCGTATTCACCGTCAGACTGGAACTGACTTAGTGGTAGACTTCAGAAATGGCTCAGTGTTGACAGCCAGTGACCTGACCAATGCAGAGCTTCAGGCTATCCATATTGCAGAAGAGGGTAGGGACCAAACGGTTGACTTAGCGAAGGAATATGCTGATGCTGCTGGTACCTCTGCCGGTAACGCTAAGGATAGCGAGGACGAAGCACGACGAATCGCTGAGGATATCAAGGCATCTGGTCGAATTGGCTATATTACCCGTCGCTCCTTCGAGAAAGGCTTCAACGTTATAACATGGAACGAGGTACTGCTATGGGAAGAGGATGGTGAGTATTACCGTTGGGATGGTACGCTTCCAAAGAACGTTCCTGCTGGTTCAACTCCTGAAACTTCCGGTGGGATTGGAGTAGGTGCGTGGGTTCTCGTAGGTGATGCTTCACTTCGTAGCGCACTAGCTTCTGAAGCAGGGGCATCAATGGTGTCCCGGAACGGCTCACCCCTAGGCAGAATCATTCGTGCGTCACTCTTCGAATACCTTACCGAATCAGATCAGCAAGCATTACTTACTACTTCTGGAGCAGTAGTTGCAGCGGATTATGCGTTAAAAGCCGCTATAGCTGCTGGAGTTATGGTCCTTGATATACCACGGAACATGGGGATTATTGAACTTGGTAGAGATCCAGCGACGCTTCCATTGGGGTTCTCGCTTATAGGATGGGGCTGCCGTCGACCTTATACTGTATCAGATGACAGTAGCTTCCTTAATTGCGGGGTAGTTATCCGCGTAGCAGCTGGGGCAAGTTTTCCTTTTTATTCAACTGGTCGTCATGTGTTCCGGGATATTGTTTTTGACGGGCGAGATAAAACAACGTATCTTTTTTATTCCACAGATAGGTATACTGAGTTCAACGGTACTCGACTAGAGGGGTGCGGAATTTATCGTTTTGCTATTGGTATTGGTTGGAATATTGGAGGAGTATCAAGGTACATTGCAACAGTAAAAGCTCATTTCTGTTCAATATCTGGAAACGGGGACGGAGTTAAGAATTTAATAGACTCTATGATGATTGGTTGCACAATCAATGCCAATGACCGAGGCGTAGCTCTTGTCGGCGGGGCAAATAGTAACTTTTTCGGAGGATGCCGGAACGAATGGAACGCTGGTGATAACTGGTATGCGTATGAATCAATAGAAAACCAGATTTCAGGTGAACTGTGCGACAGAGCTGGGCGAGGCGGGGTAGTTGCTGGCAAGGATTCGTCATGGATTGTAACCGGAGTTGTCGTCGCTCGCAGTGGTGCTAATCAACCAATGAATGATAACTACTCAGCAAACTTTGTTATTATTGATAACGGTAAAATCGTAATCTCTGGGGTGAGAACCAGAAACGGAGCTAACGAGTGGGGTCAGGGTGGGACAAATTCTCCATCGTTTAACGTATCGGTTCTTGGTTCTGGTAATGGGACACTCCTGGTATCTGGAAGTGATATGACCGGTTTTGTTACTTCGGCAATTAACCAGAAGGCTCCTACATTAAATAAAGCTATAACCGGAAATCTCGGTATGGATGATGATGTAAATGTTGGAATGTCTCAGGTTATTAAAGGAAGACGGATTATTGGTTCACAGTCATCAGGTAGATTGCAAGACGCTGTGGGAGCAACGTTATCATTCACTAAGCCCAATATTGCGCAAGATTTATATGGTACATACGTCACCAGAGCCATATTGATTGAGTGTAGAATTGGCAATACTGCACAAGGTGATTATATAAAAATACCTATAGGGGTAAGGCACGAAAACAATTTCTATCTTGATATCATCACCAGCGGAATTGTTGCAAGCTCTGGAAGGATTGGCCTTTCAGGAACGGGGGTTACTGTTAGCTTATCTATTGATAGCGCAACGGGTGCCATATCAGTCGTGTTAACTAGCGTTGATGGGCTGGTGAGAGATGTTAATGTCTCTTTACTACCATCAATGTAA

Tertiary structure

PDB ID
832b4a254a9b070ac96f1e7a7c8ab23783b30d4198aebf740b9ce296e668661a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of eight phages infecting swine Enterotoxigenic Escherichia coli Ferreira,A., Oliveira,H., Silva,D., Almeida,C., Burgan,J., Azered,J. and Oliveira,A. 2020-09-03 — GenBank