Protein

View in Explore
Genbank accession
YP_006560644.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIPNNNLNVLPFYSSLAEQNHRKPHVYGDIHPLISGSTKILPFQINRETRGNGITSVQLINHFTGVSQNITAEAQAAGLHIKPFAAQGYDLIVNNSALIFPSLVLDKAAYYLRITDGVDVWFSEIFTVVNDLTPYLKIEYWDKDAIAYTGGHIDYTAPYKNYCYIKTEIGKPEYPFEEKAQKRDGYIFIETQISEKKYKFEFLAPEYLCDALRAVRLHDYINIYFRGKKYAVENIIFDPKWKEQGNIAVMEVEFECDTIIKKVGRGAVTTSGGGSFNADFNNDFNN
Physico‐chemical
properties
protein length:286 AA
molecular weight: 32586,51120 Da
isoelectric point:5,83278
aromaticity:0,13636
hydropathy:-0,28846

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Croceibacter phage P2559S
[NCBI] 		1176422 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Croceibacter atlanticus HTCC2559
[NCBI] 		216432 Bacteria > Bacteroidetes > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Croceibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006560644.1 [NCBI]
Genbank nucleotide accession
NC_018276.1 [NCBI]
CDS location
range 21338 -> 22198
strand +
CDS
ATGATACCGAACAATAATTTAAACGTGCTGCCTTTTTACAGCAGCTTAGCAGAGCAAAACCACAGGAAGCCCCACGTGTACGGGGATATACACCCGCTTATAAGTGGCAGTACTAAAATACTACCCTTTCAAATTAATAGGGAAACACGGGGTAACGGTATTACTTCGGTGCAGCTTATTAACCACTTTACTGGCGTGTCGCAAAACATTACAGCAGAAGCGCAGGCAGCTGGCTTACATATAAAACCTTTCGCTGCGCAGGGGTATGATTTAATCGTAAATAATTCTGCTTTAATATTTCCCAGCTTGGTGCTTGATAAAGCGGCATATTACTTACGCATTACCGACGGCGTAGATGTTTGGTTTAGCGAAATATTTACAGTAGTTAATGACTTAACACCTTACTTAAAAATAGAGTACTGGGATAAAGATGCTATCGCTTACACAGGTGGGCATATAGATTATACAGCACCGTATAAAAATTACTGTTACATAAAAACAGAAATAGGTAAGCCCGAATATCCATTTGAGGAAAAGGCACAAAAGCGGGACGGTTACATATTTATCGAAACACAGATAAGCGAAAAGAAATATAAGTTTGAGTTCTTAGCACCCGAGTACCTTTGCGATGCTTTAAGGGCGGTGCGCCTGCACGACTATATTAACATATATTTCAGAGGAAAGAAGTATGCCGTGGAAAATATTATCTTTGACCCTAAATGGAAAGAACAGGGCAATATTGCAGTAATGGAAGTCGAGTTTGAATGCGACACAATAATTAAAAAGGTAGGTCGAGGGGCAGTAACTACCAGCGGCGGCGGCTCTTTTAACGCAGATTTTAACAACGATTTTAACAATTAA

Tertiary structure

PDB ID
b046d01288874f474eae4964a29bdb75f82b24794b4a53b3409d8f802b47e0a3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6109
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50