Protein

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Genbank accession
XYM48748.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MIKNVLNKYTEKVSNENVQTDDVIFDSSQNKFFTEGDPQAAEQTPETEVLPVDQTPTDKLFDALGTISTEAGFIGNVSNWFARKVSNMGVHIKDGFRYLTTWNYDPLLPLNPLSMKGFVATLDYFEVEKEIVPQPAGFKGEMLPYTAGLVSRAQVMAQVVEKVIRPATSRFGHYLTTPEDRAERRDFQYGIDIDKSIDQLIKEDAQFFANNRQSTVAFGKIYSSMNDFYESEQHMFEINTILKGGETSTVKSAVEALSQTVTALMERIGKEGDIKTSSEFAKMMSEELTQVAKWVEWFSIQMTRIIETNNVLAETEKHLRSL
Physico‐chemical
properties
protein length:322 AA
molecular weight: 36455,70810 Da
isoelectric point:4,87556
aromaticity:0,09938
hydropathy:-0,38820

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiHQ
[NCBI] 		3402740 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM48748.1 [NCBI]
Genbank nucleotide accession
PV029745.1 [NCBI]
CDS location
range 147145 -> 148113
strand -
CDS
ATGATTAAAAATGTTCTTAATAAATACACTGAGAAGGTCTCCAATGAAAACGTCCAGACTGATGACGTTATCTTTGATAGTTCTCAGAATAAGTTCTTCACTGAGGGTGATCCTCAAGCAGCAGAGCAAACCCCTGAAACAGAAGTTCTTCCTGTAGATCAAACTCCTACAGACAAACTATTCGATGCTCTGGGTACAATTTCCACTGAAGCTGGTTTCATTGGTAATGTTTCTAATTGGTTTGCCCGTAAAGTATCCAATATGGGAGTTCATATTAAAGACGGTTTCCGTTATCTGACTACGTGGAACTATGATCCGCTTCTACCTCTTAATCCTCTATCCATGAAAGGCTTTGTGGCTACTCTGGATTATTTCGAAGTTGAGAAAGAGATTGTTCCGCAACCAGCTGGCTTTAAAGGCGAAATGCTTCCATATACCGCTGGTCTGGTATCGCGTGCACAGGTAATGGCGCAAGTAGTAGAGAAGGTTATTCGACCCGCGACATCTCGTTTTGGTCATTATCTGACTACTCCTGAAGATCGTGCAGAACGTCGAGACTTCCAATACGGTATCGATATTGATAAATCGATTGACCAGCTTATTAAAGAAGACGCTCAGTTCTTTGCTAATAACCGCCAGTCAACTGTTGCATTTGGTAAGATTTACAGTTCGATGAATGACTTCTATGAATCTGAACAACATATGTTCGAGATTAATACCATTCTTAAAGGTGGTGAAACCTCTACCGTTAAGAGTGCAGTAGAAGCATTAAGCCAAACCGTAACTGCTTTGATGGAACGGATCGGTAAAGAAGGCGATATCAAAACATCCAGCGAGTTCGCTAAGATGATGTCTGAGGAACTAACCCAAGTAGCTAAGTGGGTAGAGTGGTTCTCCATTCAAATGACACGAATTATTGAAACCAATAATGTCTTAGCTGAAACAGAGAAACATCTTCGTTCTCTGTAA

Tertiary structure

PDB ID
0893d18123d8d55772648304061105f49110c2444dd42aa9cb3f85461a0ea0b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3612
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Characterization of Phikzvirus realted Pseudomonas phage phiHQ: A Promising Candidate Against Uropathogens Qamar,H., Khan,M.S.I., Afzal,S. and Malik,K. 2022-09-14 — GenBank