Protein

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Genbank accession
YP_010742574.1 [GenBank]
Protein name
putative homing endonuclease
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MNATYETIDFSVAMTNQLFTYDSKTGVIRLKSTGCKIGNINTADGGTRIECNGKTLSGARVAWIIETGNTIPPGFAVVCRQRTPGHYGNRISNLYLVDVARDPNFYA
Physico‐chemical
properties
protein length:107 AA
molecular weight: 11681,10130 Da
isoelectric point:8,90568
aromaticity:0,09346
hydropathy:-0,20187

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Oekolampad
[NCBI] 		2851982 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010742574.1 [NCBI]
Genbank nucleotide accession
NC_073089 [NCBI]
CDS location
range 26897 -> 27220
strand -
CDS
ATGAACGCTACATACGAAACCATTGATTTTTCGGTCGCAATGACTAACCAGCTATTCACCTACGACAGCAAAACCGGAGTCATCCGTCTGAAGTCCACCGGCTGCAAGATTGGCAACATCAATACTGCCGACGGCGGAACACGTATCGAATGCAACGGAAAGACGCTGTCTGGCGCACGCGTGGCGTGGATTATTGAGACGGGCAATACAATCCCTCCAGGCTTCGCCGTTGTGTGCCGCCAGCGCACTCCAGGGCACTACGGCAACCGCATAAGCAACCTTTACCTGGTAGACGTTGCACGCGACCCGAACTTTTATGCGTAA

Tertiary structure

PDB ID
e15fc81adba75e04a1f1427a462ddbbbe5c45756b875bbdd6fa2adb1c5d92b8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank