Protein

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Genbank accession
QIG72525.1 [GenBank]
Protein name
putative phage tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MSYIGAETPEVAYGKLDSSNNLSDLISLPKSRANLLVDNLPGFRNKIINGDFDIWQRGTSQTSSGYGSDDRWMNLNIGTTKTASRQSFTLGHTEVPNNPSYFSRTVVASVAGSGNYAVKSQAIEGVHFLANKTVTVTFYAKADTNRNIALEFYQSFGSGGSPSTSVSIPLGLVSLTSSWKRYSILVTLPSISGKILGSDSNHTLILNFWFDAGSTLASRASNLGQQSGTFDLSHVSVVEGDAQYETDPFSKRHLGDEIRLCYRYYTKSLNAVTWQGDTISGATYTTMLYFPVTMRTAPTLGLTIIGVNSFPSSTPTTDDLNADRCRVYLTANATNQSGFYQFQFTADAES
Physico‐chemical
properties
protein length:350 AA
molecular weight: 38052,78160 Da
isoelectric point:6,20786
aromaticity:0,10857
hydropathy:-0,24000

Domains

Domains [InterPro]
IPR008979
47–239
IPR008979
G3DSA:2.60.120.260
49–237
G3DSA:2.60.120.260
QIG72525.1
1 350
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_6
[NCBI] 		2509763 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72525.1 [NCBI]
Genbank nucleotide accession
MN988524 [NCBI]
CDS location
range 175216 -> 176268
strand -
CDS
ATGTCATATATTGGAGCAGAAACTCCTGAAGTTGCTTATGGTAAATTAGACAGTTCTAATAATCTAAGCGACTTAATTTCACTACCTAAATCACGTGCTAATCTACTAGTTGATAATCTGCCAGGTTTCAGAAATAAGATTATCAACGGTGACTTTGATATATGGCAACGAGGTACTTCTCAGACATCTTCTGGTTACGGATCTGATGATCGATGGATGAATCTGAATATCGGAACTACTAAAACTGCATCCAGGCAGTCATTCACATTGGGTCATACTGAAGTTCCAAATAATCCGTCTTACTTCAGTCGTACAGTTGTAGCCTCTGTAGCAGGTTCTGGAAATTATGCTGTAAAATCACAAGCTATAGAAGGTGTTCATTTTCTAGCTAACAAAACAGTTACAGTTACATTTTACGCTAAAGCTGATACTAATCGTAATATTGCTCTAGAATTTTACCAAAGTTTTGGTAGTGGTGGATCACCATCAACTTCAGTTTCGATCCCACTAGGTCTAGTATCTCTTACATCATCATGGAAGAGATACTCTATACTTGTAACTCTCCCATCGATTTCAGGAAAAATTCTAGGAAGTGATAGCAATCATACACTAATACTCAACTTCTGGTTTGATGCTGGATCGACTCTTGCGAGTCGAGCAAGTAACTTAGGTCAACAGTCTGGAACATTTGATCTATCTCATGTATCTGTAGTAGAGGGTGACGCTCAATATGAAACTGACCCTTTTTCAAAAAGACATCTAGGTGATGAAATCAGACTGTGCTATCGGTACTACACAAAATCATTAAATGCAGTTACATGGCAAGGTGATACGATTTCAGGTGCTACATATACTACGATGTTATATTTTCCTGTAACAATGAGAACTGCTCCTACACTTGGACTTACTATAATCGGTGTTAATAGTTTTCCTAGTAGTACGCCAACTACTGATGACTTGAATGCCGATAGATGCAGAGTATATCTAACTGCTAATGCAACAAATCAAAGTGGATTTTATCAGTTCCAATTTACAGCTGACGCTGAATCATAA

Tertiary structure

PDB ID
35e32684bd38533868ae98d906c6c157b6e63a8b274e5823a547485a7bd462cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8603
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank